June 2003 Archives by thread

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Starting: Sun Jun 1 01:20:47 EST 2003
Ending: Mon Jun 30 17:26:10 EST 2003
Messages: 348

• [Bioperl-l] Added install methods to makefile   Hilmar Lapp
  • [Bioperl-l] Added install methods to makefile   Heikki Lehvaslaiho
• [Bioperl-l] One more odd little parsing problem for your list   Hilmar Lapp
  • [Bioperl-l] One more odd little parsing problem for your list   Heikki Lehvaslaiho
• [Bioperl-l] bioperl-run 1.2.0 tarball available   Catherine Letondal
• [Bioperl-l] How can I edit a sequence?   Heikki Lehvaslaiho
  • [Bioperl-l] How can I edit a sequence?   Heikki Lehvaslaiho
    • [Bioperl-l] How can I edit a sequence?   Yee Man Chan
• [Bioperl-l] problems by installing bioperl   Heikki Lehvaslaiho
• [Bioperl-l] Whitespace in locus causes problems for parsers   Michael Muratet
• [Bioperl-l] Global version number for all bioperl modules   Heikki Lehvaslaiho
  • [Bioperl-l] Global version number for all bioperl modules   Hilmar Lapp
  • [Bioperl-l] Global version number for all bioperl modules   Heikki Lehvaslaiho
    • [Bioperl-l] Global version number for all bioperl modules   Aaron J Mackey
      • [Bioperl-l] Global version number for all bioperl modules   Heikki Lehvaslaiho
• [Bioperl-l] newick parsing internally labeled nodes   Jason Stajich
• [Bioperl-l] Multiple genbank-formatted entries in a single file   Babenko, Vladimir
• [Bioperl-l] Merged my code with bioprrl-ext-06   Yee Man Chan
  • [Bioperl-l] Re: Merged my code with bioprrl-ext-06   Aaron J Mackey
    • [Bioperl-l] Re: Merged my code with bioprrl-ext-06   Yee Man Chan
      • [Bioperl-l] Re: Merged my code with bioprrl-ext-06   Aaron J Mackey
    • [Bioperl-l] Re: Merged my code with bioprrl-ext-06   Yee Man Chan
• [Bioperl-l] bad link in bioperl.org   Juguang Xiao
  • [Bioperl-l] bad link in bioperl.org   Brian Osborne
• [Bioperl-l] bl2seq error when no alignment   Julio Fernandez Banet
  • [Bioperl-l] bl2seq error when no alignment   Jason Stajich
• [Bioperl-l] problem with batch access to GenBank   Anne-Marie Ternes
  • [Bioperl-l] problem with batch access to GenBank   Brian Osborne
    • [Bioperl-l] problem with batch access to GenBank   Anne-Marie Ternes
• [Bioperl-l] Global version number for all bioperl modules   Donald G. Jackson
  • [Bioperl-l] Global version number for all bioperl modules   Heikki Lehvaslaiho
• [Bioperl-l] passing multiple databases to blastall   Andrew Nunberg
• [Bioperl-l] loading data into bioperl-db   Michael Thon
  • [Bioperl-l] loading data into bioperl-db   Hilmar Lapp
    • [Bioperl-l] loading data into bioperl-db   Michael Thon
      • [Bioperl-l] loading data into bioperl-db   Hilmar Lapp
      • NCBI fasta format [was: Re: [Bioperl-l] loading data into bioperl-db]   Aaron J Mackey
      • NCBI fasta format [was: Re: [Bioperl-l] loading data into bioperl-db]   Peter Wilkinson
      • NCBI fasta format [was: Re: [Bioperl-l] loading data into bioperl-db]   Aaron J Mackey
• [Bioperl-l] cvs hanging ...   Aaron J Mackey
  • [Bioperl-l] cvs hanging ...   Steve Chervitz
• [Bioperl-l] SearchIO::blast.pm developer notes   Steve Chervitz
• [Bioperl-l] passing multiple databases to blastall   Paul Boutros
• [Bioperl-l] Problem with load_seqdatabase   albert vilella
• [Bioperl-l] Query seq with gaps in blast   Julio Fernandez Banet
• [Bioperl-l] bl2seq parse nightmare   Jason Stajich
• [Bioperl-l] bl2seq parse nightmare   Julio Fernandez Banet
• [Bioperl-l] wwwblast standalone   Line Neil
  • [Bioperl-l] wwwblast standalone   Sang Chul Choi
• [Bioperl-l] Parsing BLASTP or TBLASTN reveals subtle query_length = 0 bug   Matthew Vaughn
• [Bioperl-l] Fixed the previously reported BLAST query length issue   Matthew Vaughn
  • [Bioperl-l] Fixed the previously reported BLAST query length issue   Jason Stajich
• [Bioperl-l] rank in bioperl-db PersistentObjectI   Hilmar Lapp
• NCBI fasta format [was: Re: [Bioperl-l] loading data into bioperl-db]   Hilmar Lapp
  • NCBI fasta format [was: Re: [Bioperl-l] loading data into bioperl-db]   Aaron J Mackey
    • NCBI fasta format [was: Re: [Bioperl-l] loading data into bioperl-db]   Hilmar Lapp
    • NCBI fasta format [was: Re: [Bioperl-l] loading data into bioperl-db]   Hilmar Lapp
      • NCBI fasta format [was: Re: [Bioperl-l] loading data into bioperl-db]   Aaron J Mackey
• [Bioperl-l] rank in bioperl-db PersistentObjectI   Michael Thon
• [Bioperl-l] how to use BioQuery   Michael Thon
  • [Bioperl-l] how to use BioQuery   Hilmar Lapp
    • [Bioperl-l] how to use BioQuery   Juguang Xiao
      • [Bioperl-l] how to use BioQuery   Hilmar Lapp
• [Bioperl-l] Re: [Bioperl-guts-l] bioperl commit   Sally Li
• [Bioperl-l] acc does not exist   Brent and Johnetta Smith
  • [Bioperl-l] acc does not exist   Brian Osborne
  • [Bioperl-l] acc does not exist   Heikki Lehvaslaiho
• NCBI fasta format [was: Re: [Bioperl-l] loading data intobioperl-db]   Cook, Malcolm
• [Bioperl-l] (no subject)   Zhuozhi Wang
• [Bioperl-l] strand() question   hackstam
  • [Bioperl-l] strand() question   Brian Osborne
    • [Bioperl-l] strand() question   Steve Chervitz
      • [Bioperl-l] strand() question   Jason Stajich
      • [Bioperl-l] strand() question   Steve Chervitz
• [Bioperl-l] Running remote blast example   Vikas Daga
  • [Bioperl-l] Running remote blast example   Vikas Daga
    • [Bioperl-l] Running remote blast example   Vikas Daga
• NCBI fasta format [was: Re: [Bioperl-l] loading data intobioperl-db]   Peter Wilkinson
  • NCBI fasta format [was: Re: [Bioperl-l] loading data intobioperl-db]   Matthew Pocock
• [Bioperl-l] (no subject)   Jason Stajich
  • perl <-> java [was Re: [Bioperl-l] (no subject)]   Juguang Xiao
    • perl <-> java [was Re: [Bioperl-l] (no subject)]   Stephen Montgomery
      • perl <-> java [was Re: [Bioperl-l] (no subject)]   Juguang Xiao
    • [Bioperl-l] Is this a bug?   Sally Li
• [Bioperl-l] Bio::DB:: queries   Hilmar Lapp
• [Bioperl-l] OBDA/Flat question   Elia Stupka
  • [Bioperl-l] OBDA/Flat question   Brian Osborne
    • [Bioperl-l] OBDA/Flat question   Heikki Lehvaslaiho
      • [Bioperl-l] OBDA/Flat question   Brian Osborne
    • [Bioperl-l] OBDA/Flat question   Lincoln Stein
• [Bioperl-l] OBDA/Flat question   Hilmar Lapp
• [Bioperl-l] Bio::DB:: queries   Jason Stajich
  • [Bioperl-l] Bio::DB:: queries   Prachi Shah
    • [Bioperl-l] Bio::DB:: queries   Jason Stajich
  • [Bioperl-l] Bio::DB:: queries   Qing Lyne Gao
• [Bioperl-l] blastall and blosum62 problem   Mariano Latorre A
  • [Bioperl-l] blastall and blosum62 problem   Jason Stajich
  • [Bioperl-l] blastall and blosum62 problem   Ian Korf
• [Bioperl-l] Bio::DB:: queries   Jonathan Epstein
• [Bioperl-l] Eclipse Perl IDE (EPIC)   Steve Chervitz
• [Bioperl-l] Sequence Validation   Matthew Laird
  • [Bioperl-l] Sequence Validation   Jason Stajich
    • [Bioperl-l] Sequence Validation   Matthew Laird
      • [Bioperl-l] Sequence Validation   Brian Osborne
      • [Bioperl-l] Sequence Validation   Matthew Laird
      • [Bioperl-l] Sequence Validation   Jason Stajich
      • [Bioperl-l] Sequence Validation   Hilmar Lapp
      • [Bioperl-l] validate_seq() note   Brian Osborne
• [Bioperl-l] Sequence Validation   Hilmar Lapp
  • [Bioperl-l] Sequence Validation   Jason Stajich
• [Bioperl-l] Bio::DB::GFF and Gadfly GFFs question   Venky Nandagopal
  • [Bioperl-l] Bio::DB::GFF and Gadfly GFFs question   Jason Stajich
• [Bioperl-l] Re:Smith waterman Alignment   M K. Govind
  • [Bioperl-l] Re:Smith waterman Alignment   Ewan Birney
• [Bioperl-l] retreive GenBank Seq - the same script always worked before but now ...   Qunfeng Dong
  • [Bioperl-l] retreive GenBank Seq - the same script always worked before but now ...   Heikki Lehvaslaiho
• [Bioperl-l] how to get the database name for Bio::Seq->accession_number?   Peili Zhang
• [Bioperl-l] Statistical Methods in Bioinformatics: An Introduction   Serge Ivahno
• [Bioperl-l] GenPept   jkrzywin at nd.edu
• [Bioperl-l] cpu time contribution   Catherine Letondal
• [Bioperl-l] How to get refseq sequence object?   Jack Chen
  • [Bioperl-l] How to get refseq sequence object?   Jason Stajich
• [Bioperl-l] from protein to nucleotide   Jack Chen
• [Bioperl-l] Bio::Tools::Genscan initialization ?   Bryony Lloyd
  • [Bioperl-l] Bio::Tools::Genscan initialization ?   Jason Stajich
• [Bioperl-l] get_Seq_by_acc() in Bio::DB::GeneBank failed   Qunfeng Dong
• [Bioperl-l] from protein to nucleotide   Marc Logghe
  • [Bioperl-l] from protein to nucleotide   Jason Stajich
• [Bioperl-l] How to retrieve introns / exons from EMBL?   Ole Schulz-Trieglaff
  • [Bioperl-l] How to retrieve introns / exons from EMBL?   Brian Osborne
    • [Bioperl-l] How to retrieve introns / exons from EMBL?   ole.st at gmx.de
      • [Bioperl-l] How to retrieve introns / exons from EMBL?   Jason Stajich
      • [Bioperl-l] How to retrieve introns / exons from EMBL?   Ole Schulz-Trieglaff
      • [Bioperl-l] How to retrieve introns / exons from EMBL?   Jason Stajich
      • [Bioperl-l] How to retrieve introns / exons from EMBL?   Ole Schulz-Trieglaff
• [Bioperl-l] get_Seq_by_acc() in Bio::DB::GeneBank failed   jun hu
• [Bioperl-l] get_Seq_by_acc() in Bio::DB::GeneBank failed   jun hu
• [Bioperl-l] call bioperl methods from java   Sally Li
  • [Bioperl-l] call bioperl methods from java   Aaron J Mackey
• [Bioperl-l] sequence validation   William R.Pearson
  • [Bioperl-l] sequence validation   Joel Martin
• [Bioperl-l] Undeliverable Mail   Postmaster
• [Bioperl-l] Returned mail: see transcript for details   Mail Delivery Subsystem
• [Bioperl-l] Undeliverable Mail   Postmaster
• [Bioperl-l] Report to Recipient(s)   QOLOTUS05 at genelogic.com
• [Bioperl-l] Undeliverable Mail   Postmaster
• [Bioperl-l] Returned mail: see transcript for details   Mail Delivery Subsystem
• [Bioperl-l] Report to Recipient(s)   QOLOTUS00 at genelogic.com
• [Bioperl-l] New to Bioperl   Niels Larsen
  • [Bioperl-l] New to Bioperl   Hilmar Lapp
• [Bioperl-l] GFF3 Specification   Lincoln Stein
• [Bioperl-l] Re: stale links, EMBL loading   Hilmar Lapp
  • [Bioperl-l] Re: stale links, EMBL loading   Niels Larsen
    • [Bioperl-l] Re: stale links, EMBL loading   Hilmar Lapp
• [Bioperl-l] Problem installing staden io_lib   Andreas Boehm
  • [Bioperl-l] Problem installing staden io_lib   Aaron J Mackey
• [Bioperl-l] How to use Proxy in Bioperl programming?   du
• [Bioperl-l] UCSC database -> GFF   Paul Edlefsen
  • [Bioperl-l] Re: UCSC database -> GFF   Allen Day
  • [Bioperl-l] UCSC database -> GFF   Jason Stajich
    • [Bioperl-l] UCSC database -> GFF   Paul Edlefsen
    • [Bioperl-l] UCSC database -> GFF   Lincoln Stein
      • [Bioperl-l] UCSC database -> GFF   Allen Day
      • [Bioperl-l] UCSC database -> GFF   Lincoln Stein
      • [Bioperl-l] UCSC database -> GFF   Ewan Birney
      • [Bioperl-l] UCSC database -> GFF   Hilmar Lapp
      • [Bioperl-l] UCSC database -> GFF   Paul Edlefsen
      • [Bioperl-l] UCSC database -> GFF   Allen Day
      • [Bioperl-l] UCSC database -> GFF   Paul Edlefsen
• [Bioperl-l] Bio::FeatureHolderI interface confusion   Chris Mungall
  • [Bioperl-l] Bio::FeatureHolderI interface confusion   Ewan Birney
    • [Bioperl-l] Bio::FeatureHolderI interface confusion   Chris Mungall
      • [Bioperl-l] Bio::FeatureHolderI interface confusion   Lincoln Stein
• [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Jason Stajich
  • [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Lincoln Stein
    • [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Ewan Birney
  • [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Chris Mungall
• [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Chris Mungall
• [Bioperl-l] Bio::FeatureHolderI interface confusion   Hilmar Lapp
  • [Bioperl-l] Bio::FeatureHolderI interface confusion   Chris Mungall
    • [Bioperl-l] Bio::FeatureHolderI interface confusion   Hilmar Lapp
      • [Bioperl-l] Bio::FeatureHolderI interface confusion   Chris Mungall
      • [Hackathon] Re: [Bioperl-l] Bio::FeatureHolderI interface confusion   Mark Wilkinson
      • [Bioperl-l] Bio::FeatureHolderI interface confusion   Ewan Birney
      • [Bioperl-l] Bio::FeatureHolderI interface confusion   Hilmar Lapp
      • [Bioperl-l] Bio::FeatureHolderI interface confusion   Paul Edlefsen
      • [Bioperl-l] Bio::FeatureHolderI interface confusion   Hilmar Lapp
      • [Bioperl-l] Bio::FeatureHolderI interface confusion   Matthew Pocock
    • [Bioperl-l] Bio::FeatureHolderI interface confusion   Lincoln Stein
      • [Bioperl-l] Bio::FeatureHolderI interface confusion   Chris Mungall
      • [Bioperl-l] Bio::FeatureHolderI interface confusion   Lincoln Stein
      • [Bioperl-l] Bio::FeatureHolderI interface confusion   Chris Mungall
      • [Bioperl-l] Bio::FeatureHolderI interface confusion   Hilmar Lapp
      • [Bioperl-l] Bio::FeatureHolderI interface confusion   Paul Edlefsen
      • [Bioperl-l] Bio::FeatureHolderI interface confusion   Hilmar Lapp
  • [Bioperl-l] Bio::FeatureHolderI interface confusion   Steve Mathias
• [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Hilmar Lapp
  • [BioPerl] RE: [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Mark Wilkinson
    • [BioPerl] RE: [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Chris Mungall
  • [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   David Block
  • [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Lincoln Stein
    • [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Chris Mungall
      • [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Paul Edlefsen
      • [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Lincoln Stein
      • [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Ewan Birney
    • [BioPerl] Re: [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Mark Wilkinson
    • [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Ewan Birney
• [Bioperl-l] RE: Bio::FeatureHolderI interface confusion   Nathan (Nat) Goodman
  • [Bioperl-l] RE: Bio::FeatureHolderI interface confusion   Ewan Birney
    • [Bioperl-l] RE: Bio::FeatureHolderI interface confusion   Nathan (Nat) Goodman
      • [Bioperl-l] RE: Bio::FeatureHolderI interface confusion   Ewan Birney
    • [Bioperl-l] RE: Bio::FeatureHolderI interface confusion   Steve Chervitz
      • [Bioperl-l] RE: Bio::FeatureHolderI interface confusion   Nathan (Nat) Goodman
      • [Bioperl-l] Re: Bio::FeatureHolderI interface confusion   Steve Chervitz
      • [Bioperl-l] RE: BioPAN   Steve Mathias
  • [Bioperl-l] RE: Bio::FeatureHolderI interface confusion   Chris Mungall
    • [Bioperl-l] Re: Bio::FeatureHolderI interface confusion   Paul Edlefsen
      • [Bioperl-l] Re: Bio::FeatureHolderI interface confusion   Lincoln Stein
• [Bioperl-l] Fw: RE: Whitespace in locus causes problems for parsers   Michael Muratet
• [Bioperl-l] BioSQL: loading large sequence records, and taxon parsing   Xiaoying Lin
  • [Bioperl-l] BioSQL: loading large sequence records, and taxon parsing   Hilmar Lapp
    • plastid genetic code (was: [Bioperl-l] BioSQL: loading large sequence records, and taxon parsing)   Will Fischer
• [Bioperl-l] RE: Bio::FeatureHolderI interface confusion (Hilmar Lapp)   Nathan (Nat) Goodman
  • [Bioperl-l] RE: Bio::FeatureHolderI interface confusion (Hilmar Lapp)   Hilmar Lapp
    • [Bioperl-l] RE: Bio::FeatureHolderI interface confusion (Hilmar Lapp)   Nathan (Nat) Goodman
      • [Bioperl-l] RE: Bio::FeatureHolderI interface confusion   Hilmar Lapp
      • [Bioperl-l] BioPAN   Heikki Lehvaslaiho
      • [Bioperl-l] RE: BioPAN   Nathan (Nat) Goodman
      • [Bioperl-l] RE: BioPAN   Heikki Lehvaslaiho
• [Bioperl-l] BioSQL: loading large sequence records, and taxon parsing   Xiaoying Lin
  • [Bioperl-l] BioSQL: loading large sequence records, and taxon parsing   Hilmar Lapp
  • [Bioperl-l] BioSQL: loading large sequence records, and taxon parsing   Juguang Xiao
    • [Bioperl-l] BioSQL: loading large sequence records, and taxon parsing   Elia Stupka
      • [Bioperl-l] BioSQL: loading large sequence records, and taxon parsing   Hilmar Lapp
• [Bioperl-l] module for unflattening GenBank/EMBL/DDBJ records   Chris Mungall
  • [Bioperl-l] module for unflattening GenBank/EMBL/DDBJ records   Ewan Birney
    • [Bioperl-l] module for unflattening GenBank/EMBL/DDBJ records   Chris Mungall
      • [Bioperl-l] module for unflattening GenBank/EMBL/DDBJ records   Jason Stajich
      • [Bioperl-l] module for unflattening GenBank/EMBL/DDBJ records   Lincoln Stein
      • [Bioperl-l] module for unflattening GenBank/EMBL/DDBJ records   Ewan Birney
      • [Bioperl-l] module for unflattening GenBank/EMBL/DDBJ records   Chris Mungall
      • [Bioperl-l] module for unflattening GenBank/EMBL/DDBJ records   Hilmar Lapp
  • [Bioperl-l] module for unflattening GenBank/EMBL/DDBJ records   Lincoln Stein
• [Bioperl-l] Bio::FeatureHolderI interface confusion   Peter Wilkinson
  • [Bioperl-l] Bio::FeatureHolderI interface confusion   Hilmar Lapp
• [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   SLetovsky at aol.com
• [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Peili Zhang
  • [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Jason Stajich
• [Bioperl-l] Bioperl Dependancies   Sunitha Thodupunuri
  • [Bioperl-l] Bioperl Dependancies   Lincoln Stein
• [Bioperl-l] Please unscribe me, email hesn@email.uc.edu   Suiwen He
• [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Peili Zhang
  • [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Chris Mungall
    • [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Jason Stajich
    • [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Lincoln Stein
  • [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Jason Stajich
• [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Peili Zhang
  • [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Chris Mungall
• [Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO   Peili Zhang
• [Bioperl-l] srsperl.pm   Sunitha Thodupunuri
  • [Bioperl-l] srsperl.pm   Heikki Lehvaslaiho
• [Hackathon] Re: [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Mark Wilkinson
  • [Hackathon] Re: [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Lincoln Stein
    • [Hackathon] Re: [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Mark Wilkinson
      • [Hackathon] Re: [Bioperl-l] proposed change to Bio::SeqFeature::Gene::*   Chris Mungall
• [Bioperl-l] Bioperl Dependancies   Marc Logghe
• [Bioperl-l] Re: Bio::Tree::RandomFactory   Ewan Birney
  • [Bioperl-l] Re: Bio::Tree::RandomFactory   Jason Stajich
• [Bioperl-l] BioSQL: loading large sequence records, and taxon parsing   Lin, Xiaoying
• [Bioperl-l] Bio::Ontology additions   Allen Day
  • [Bioperl-l] Bio::Ontology additions   Hilmar Lapp
    • [Bioperl-l] Bio::Ontology additions   Allen Day
• [Bioperl-l] BioSQL: loading large sequence records, and taxon parsing   Hilmar Lapp
• [Bioperl-l] BioSQL: loading large sequence records, and taxon parsing   Hilmar Lapp
• [Bioperl-l] Nucleotide analysis modules - bugzilla # 1422   Rob Edwards
  • [Bioperl-l] Nucleotide analysis modules - bugzilla # 1422   Hilmar Lapp
    • [Bioperl-l] Nucleotide analysis modules - bugzilla # 1422   Heikki Lehvaslaiho
• [Bioperl-l] Nucleotide analysis modules - bugzilla # 1422   Hilmar Lapp
  • [Bioperl-l] Bio::Tools   Rob Edwards
    • [Bioperl-l] Bio::Tools   Jason Stajich
• [Bioperl-l] using LargeSeq objects   Michael R Olson
  • [Bioperl-l] using LargeSeq objects   Morten Lindow
    • [Bioperl-l] using LargeSeq objects   Brian Osborne
      • [Bioperl-l] using LargeSeq objects   Jason Stajich
      • [Bioperl-l] using LargeSeq objects   Brian Osborne
• [Bioperl-l] Bio::SeqFeature::Gene::*   Josh Lauricha
  • [Bioperl-l] Bio::SeqFeature::Gene::*   Jason Stajich
• [Bioperl-l] install 1.2.1 help newbie   Julian Dow
  • [Bioperl-l] install 1.2.1 help newbie   Brian Osborne
• [Bioperl-l] Bio::Graphics help   Marc Logghe
• [Bioperl-l] assembly assessment   Christie Robertson
• [Bioperl-l] Bio::Graphics help   June Tantoolvesm
• [Bioperl-l] sorting and indexing matricies   PD Schloss
  • [Bioperl-l] sorting and indexing matricies   Morten Lindow
    • [Bioperl-l] sorting and indexing matricies   Shawn Hoon
• [Bioperl-l] sorting and indexing matricies   Marc Logghe
• [Bioperl-l] StandAloneBlast (bl2seq) v. 2.2.6 problems   David Arenillas
• [Bioperl-l] ODBA Registry bugs , release 1.2.2 needed   Heikki Lehvaslaiho
  • [Bioperl-l] ODBA Registry bugs , release 1.2.2 needed   Brian Osborne
  • [Bioperl-l] ODBA Registry bugs , release 1.2.2 needed   Hilmar Lapp
    • [Bioperl-l] Release plan for 1.2.2   Heikki Lehvaslaiho
      • [Bioperl-l] Release plan for 1.2.2   Catherine Letondal
      • [Bioperl-l] Release plan for 1.2.2   Jason Stajich
      • [Bioperl-l] Release plan for 1.2.2   Hilmar Lapp
• [Bioperl-l] Saving BLAST reports   Michael R Olson
  • [Bioperl-l] Saving BLAST reports   Jason Stajich
• [Bioperl-l] change the location coordinates of a Bio::SeqFeatureI object   Peili Zhang
• [Bioperl-l] change the location coordinates of a Bio::SeqFeat ureI object   Marc Logghe
  • [Bioperl-l] change the location coordinates of a Bio::SeqFeat ureI object   Jason Stajich
• [Bioperl-l] change the location coordinates of a Bio::SeqFeat ureI object   Peili Zhang
• [Bioperl-l] sequence upgrading   Marc Logghe
  • [Bioperl-l] sequence upgrading   Hilmar Lapp
• [Bioperl-l] sequence upgrading   Marc Logghe
  • [Bioperl-l] sequence upgrading   Hilmar Lapp
• [Bioperl-l] sequence upgrading   Marc Logghe
  • [Bioperl-l] sequence upgrading   Heikki Lehvaslaiho
    • [Bioperl-l] sequence upgrading   Hilmar Lapp
  • [Bioperl-l] sequence upgrading   Hilmar Lapp
• [Bioperl-l] change the location coordinates of a Bio::SeqFeat ureI object   Peili Zhang
• [Bioperl-l] Bio::Graphics::Glyph::translation magnification??   Sofia
• [Bioperl-l] sequence upgrading   Marc Logghe
  • [Bioperl-l] sequence upgrading   Jamie Hatfield
• [Bioperl-l] Generating multiple fasta files from an embl file   Adam Witney
  • [Bioperl-l] Generating multiple fasta files from an embl file   Brian Osborne
  • [Bioperl-l] Generating multiple fasta files from an embl file   Jason Stajich
    • [Bioperl-l] Generating multiple fasta files from an embl file   Heikki Lehvaslaiho
      • [Bioperl-l] Generating multiple fasta files from an embl file   Brian Osborne
• [Bioperl-l] Bio::DB::Fasta   Michael R Olson
  • [Bioperl-l] Bio::DB::Fasta   Brian Osborne
    • [Bioperl-l] Bio::DB::Fasta   Michael R Olson
      • [Bioperl-l] Bio::DB::Fasta   Brian Osborne
      • [Bioperl-l] Bio::DB::Fasta   Heikki Lehvaslaiho
• [Bioperl-l] sequence upgrading   Marc Logghe
• [Bioperl-l] sequence upgrading   Marc Logghe
• [Bioperl-l] Count amino acid frequency   Stephan Bour
  • [Bioperl-l] Count amino acid frequency   Brian Osborne
    • [Bioperl-l] Count amino acid frequency   Stephan Bour
      • [Bioperl-l] Count amino acid frequency   Brian Osborne
      • [Bioperl-l] Count amino acid frequency   Stephan Bour
• [Bioperl-l] Can't get Bio::Tools::StandAloneBlast blastall to work in a cgi script   hackstam
  • [Bioperl-l] Can't get Bio::Tools::StandAloneBlast blastall to work in a cgi script   Jason Stajich
• [Bioperl-l] progress for 1.2.2 bugfix releae   Jason Stajich
  • [Bioperl-l] progress for 1.2.2 bugfix releae   Lincoln Stein
    • [Bioperl-l] progress for 1.2.2 bugfix releae   Heikki Lehvaslaiho
  • [Bioperl-l] progress for 1.2.2 bugfix releae   Heikki Lehvaslaiho
  • [Bioperl-l] progress for 1.2.2 bugfix releae   Aaron J Mackey
    • [Bioperl-l] progress for 1.2.2 bugfix releae   Aaron J Mackey
    • [Bioperl-l] progress for 1.2.2 bugfix releae   Heikki Lehvaslaiho

Last message date: Mon Jun 30 17:26:10 EST 2003
Archived on: Mon Jun 30 12:26:12 EST 2003

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