[Bioperl-l] ODBA Registry bugs , release 1.2.2 needed

Brian Osborne brian_osborne at cognia.com
Wed Jun 25 11:38:57 EDT 2003


I know of one bug that's not fixed, 1441. First things first - can someone
replicate it?

Brian O.

-----Original Message-----
From: bioperl-l-bounces at portal.open-bio.org
[mailto:bioperl-l-bounces at portal.open-bio.org]On Behalf Of Heikki
Sent: Wednesday, June 25, 2003 10:10 AM
To: Bioperl
Subject: [Bioperl-l] ODBA Registry bugs , release 1.2.2 needed

In the light of us trying to promote the use of OBDA Registry, it is
pretty bad form that the code in bioperl release 1.2.1 does not work at
all! The parser chokes on the ini file VERSION line and wrong parameter
is passed when retrieving a sequence based on accession number.

It works in the CVS head and I just fixed it in the 1.2.1 branch.

I think we need to release the 1.2.2 as soon as possible. In practical
term that means after next week when Ewan is back from his honeymoon.

If you know any major bugs that has been fixed in the CVS head since the
last release, please port them into 1.2 branch or report them to the


______ _/      _/_____________________________________________________
      _/      _/                      http://www.ebi.ac.uk/mutations/
     _/  _/  _/  Heikki Lehvaslaiho    heikki_at_ebi ac uk
    _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
   _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
  _/  _/  _/  Cambs. CB10 1SD, United Kingdom
     _/      Phone: +44 (0)1223 494 644   FAX: +44 (0)1223 494 468
___ _/_/_/_/_/________________________________________________________

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