[Bioperl-l] Re: [Bioperl-announce-l] an extension to Bio::SeqIO

Lincoln Stein lstein at cshl.edu
Wed Jun 18 17:49:20 EDT 2003

> By the way, where does GFF fit into the *IO framework? Right now it's a
> Bio::Tools thing. Will there be a Bio::SeqFeatureIO?

GFF was left out of the IO framework originally because the format doesn't 
store the sequence string.  The GFF3 proposal has a way to embed the string, 
so that can probably be remedied now.


Lincoln D. Stein                           Cold Spring Harbor Laboratory
lstein at cshl.org			                  Cold Spring Harbor, NY

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