[Bioperl-l] Release plan for 1.2.2

Heikki Lehvaslaiho heikki at ebi.ac.uk
Thu Jun 26 10:09:43 EDT 2003

Let's try to get all bug fixes into 1.2 branch (cvs tag 'branch-1-2') by
Monday the 30 evening. I'll create the first release candidate on 1 July
Tuesday. Hopefully 

The cvs modules in question are:

* bioperl-live, tag 'branch-1-2'
* bioperl-run,  tag 'bioperl-run-release-1-2-0' (is this right?)

The command line to get branches  out of CVS is (change LOGIN to your
personal login or to 'cvs' for anonymous checkouts):

% cvs -d :ext:LOGIN at pub.open-bio.org:/home/repository/bioperl \
    co -r branch-1-2 bioperl-live
% cvs -d :ext:LOGIN at pub.open-bio.org:/home/repository/bioperl \
    co -r bioperl-run-release-1-2-0 bioperl-run

All changes should be logged into 'Changes' file in the top directory.

Hilmar, can you make sure ontology/biodb fixes will be in branch before

Cathrine, you have been making changes to PISE modules in the
bioperl-run at CVS HEAD. Should those changes be copied over into the
branch or are the current branch modules still functional and up to date

Anyone running cygwin,

Brian reported  a problem running scripts/DB/biogetseq.PLS for the first
time under cygwin:
Can anyone replicate the problem?


On Thu, 2003-06-26 at 08:26, Hilmar Lapp wrote:
> On Thursday, June 26, 2003, at 12:10  AM, Heikki Lehvaslaiho wrote:
> > I think we need to release the 1.2.2 as soon as possible. In practical
> > term that means after next week when Ewan is back from his honeymoon.
> > ;-)
> >
> Heikki, if you tar up a release candidate and place calls for 
> cross-platform testing, we can release earlier than that. I'm 
> definitely interested getting it out of the door ASAP as some ontology 
> fixes almost necessary for the bioperl-db load_ontology.pl script are 
> only on the stable branch, but not in 1.2.1.
> 	-hilmar
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     _/  _/  _/  Heikki Lehvaslaiho    heikki_at_ebi ac uk
    _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
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  _/  _/  _/  Cambs. CB10 1SD, United Kingdom
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