2002-December Archives by Thread

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Starting: Sun Dec 1 16:04:00 2002
Ending: Tue Dec 31 20:21:04 2002
Messages: 357

• [Bioperl-l] Pushing towards 1.2   Ewan Birney
  • [Bioperl-l] Pushing towards 1.2   Lincoln Stein
    • [Bioperl-l] Pushing towards 1.2   Elia Stupka
    • [Bioperl-l] Pushing towards 1.2   Ewan Birney
  • [Bioperl-l] Pushing towards 1.2   Hilmar Lapp
    • [Bioperl-l] Pushing towards 1.2   Jason Stajich
      • [Bioperl-l] Pushing towards 1.2   Ewan Birney
      • [Bioperl-l] Pushing towards 1.2   Jason Stajich
      • [Bioperl-l] Pushing towards 1.2   Hilmar Lapp
• [Bioperl-l] RE: All done with Bio::DB::Query   Paul Boutros
  • [Bioperl-l] RE: All done with Bio::DB::Query   Lincoln Stein
    • [Bioperl-l] RE: All done with Bio::DB::Query   Paul Boutros
      • [Bioperl-l] RE: All done with Bio::DB::Query   Lincoln Stein
      • [Bioperl-l] RE: All done with Bio::DB::Query   Paul Boutros
      • [Bioperl-l] RE: All done with Bio::DB::Query   Lincoln Stein
      • [Bioperl-l] RE: All done with Bio::DB::Query   Paul Boutros
      • [Bioperl-l] RE: All done with Bio::DB::Query   Ewan Birney
      • [Bioperl-l] Not done with Bio::DB::Query [WAS: All done with Bio::DB::Query]   Lincoln Stein
      • [Bioperl-l] Not done with Bio::DB::Query [WAS: All done with Bio::DB::Query]   Paul Boutros
      • [Bioperl-l] Not done with Bio::DB::Query [WAS: All done with Bio::DB::Query]   Lincoln Stein
      • [Bioperl-l] Not done with Bio::DB::Query [WAS: All done with Bio::DB::Query]   Lincoln Stein
      • [Bioperl-l] Not done with Bio::DB::Query [WAS: All done with Bio::DB::Query]   Paul Boutros
• [Bioperl-l] NCBI eutils   Lincoln Stein
• [Bioperl-l] LocusLink IO   Hilmar Lapp
  • [Bioperl-l] LocusLink IO   Paul Boutros
    • [Bioperl-l] LocusLink IO   Allen Day
• [Bioperl-l] Question: creating an empty Bio::Seq object   Scott Cain
  • [Bioperl-l] Question: creating an empty Bio::Seq object   Ewan Birney
• [Bioperl-l] Question: creating an empty Bio::Seq object   Hilmar Lapp
• [Bioperl-l] Question: creating an empty Bio::Seq object   Hilmar Lapp
  • [Bioperl-l] Question: creating an empty Bio::Seq object   Scott Cain
• [Bioperl-l] parsing 'parsed blast data'   Charles Hauser
• [Bioperl-l] Question: creating an empty Bio::Seq object   Hilmar Lapp
• [Bioperl-l] capturing AlignIO output   James Wasmuth
  • [Bioperl-l] capturing AlignIO output   Ewan Birney
  • [Bioperl-l] capturing AlignIO output   Jason Stajich
• [Bioperl-l] capturing AlignIO output   James Wasmuth
• [Bioperl-l] parsing 'parsed blast data'   Wiepert, Mathieu
• [Bioperl-l] All roads lead to Bio::Seq   Ewan Birney
  • [Bioperl-l] All roads lead to Bio::Seq   Lincoln Stein
• [Bioperl-l] Blast stuff   Ewan Birney
  • [Bioperl-l] Blast stuff   Hilmar Lapp
    • [Bioperl-l] Blast stuff   Ewan Birney
      • [Bioperl-l] Blast stuff   Hilmar Lapp
      • [Bioperl-l] Blast stuff   Ewan Birney
  • [Bioperl-l] Blast stuff   Hilmar Lapp
  • [Bioperl-l] Blast stuff   Steve Chervitz
    • [Bioperl-l] Blast stuff   Jason Stajich
      • [Bioperl-l] Blast stuff   Ewan Birney
      • [Bioperl-l] Blast stuff   Steve Chervitz
      • [Bioperl-l] Blast stuff   Ewan Birney
  • [Bioperl-l] Blast stuff   Elia Stupka
  • [Bioperl-l] Blast stuff   Jason Stajich
    • [Bioperl-l] Blast stuff   Elia Stupka
  • [Bioperl-l] Blast stuff   Lincoln Stein
• [Bioperl-l] [cpan #667] Make Maker with LARGE module list (fwd)   Jason Stajich
• [Bioperl-l] speedbumps   Rob Edwards
  • [Bioperl-l] speedbumps   Ewan Birney
    • [Bioperl-l] speedbumps   Hilmar Lapp
• [Bioperl-l] please remove me from the list   Eli Berkovich
• [Bioperl-l] GO parser   Allen Day
• [Bioperl-l] bug in location->to_FTstring   Philip Lijnzaad
  • [Bioperl-l] bug in location->to_FTstring   Hilmar Lapp
    • [Bioperl-l] bug in location->to_FTstring   Philip Lijnzaad
      • [Bioperl-l] bug in location->to_FTstring   Jason Stajich
      • [Bioperl-l] bug in location->to_FTstring   Philip Lijnzaad
      • [Bioperl-l] bug in location->to_FTstring   Philip Lijnzaad
      • [Bioperl-l] bug in location->to_FTstring   Hilmar Lapp
      • [Bioperl-l] bug in location->to_FTstring   Hilmar Lapp
• [Bioperl-l] All roads lead to Bio::Seq   Viren Konde
• [Bioperl-l] HSP brain rot...   James Wasmuth
• [Bioperl-l] ProtDist.pm   Tyler
  • [Bioperl-l] ProtDist.pm   Jason Stajich
  • [Bioperl-l] ProtDist.pm   Jason Stajich
• [Bioperl-l] RE: Pushing towards 1.2 -- simpleGOparser.t   Chris Zmasek
• [Bioperl-l] Windows Testing   Paul Boutros
  • [Bioperl-l] Windows Testing   Lincoln Stein
    • [Bioperl-l] Windows Testing   Ewan Birney
    • [Bioperl-l] Windows Testing   Paul Boutros
      • [Bioperl-l] Windows Testing   Lincoln Stein
• [Bioperl-l] RE: NCBI eutils   NIH Email Delivery
• [Bioperl-l] could not load phrap error   =?iso-8859-1?q?eicke=20felipe?=
  • [Bioperl-l] could not load phrap error   Robson Francisco de Souza
  • [Bioperl-l] could not load phrap error   Jason Stajich
    • [Bioperl-l] could not load phrap error   =?iso-8859-1?q?eicke=20felipe?=
      • [Bioperl-l] could not load phrap error   Jason Stajich
• [Bioperl-l] Merging exons in all transcripts for a gene   Jason Stajich
• [Bioperl-l] Inhereting environmental variables   Andy Nunberg
  • [Bioperl-l] Inhereting environmental variables   Jason Stajich
  • [Bioperl-l] Inhereting environmental variables   david coornaert
• [Bioperl-l] ANN: O'Reilly's 2003 Bioinformatics Technology Conference   Harry Mangalam
  • [Bioperl-l] Re: ANN: O'Reilly's 2003 Bioinformatics Technology Conference   Harry Mangalam
• [Bioperl-l] DNA Smith-Waterman?   Yee Man
  • [Bioperl-l] DNA Smith-Waterman?   Ewan Birney
    • [Bioperl-l] DNA Smith-Waterman?   Yee Man
• [Bioperl-l] DNA Smith-Waterman?   nkuipers
• [Bioperl-l] Creating Genbank file   Vilanova,David,LAUSANNE,NRC-BS
  • [Bioperl-l] Creating Genbank file   Jason Stajich
• [Bioperl-l] Bio::Root::Root::new()   Heikki Lehvaslaiho
  • [Bioperl-l] Re: Bio::Root::Root::new()   Hilmar Lapp
    • [Bioperl-l] Re: Bio::Root::Root::new()   Heikki Lehvaslaiho
      • [Bioperl-l] Re: Bio::Root::Root::new()   Lincoln Stein
• [Bioperl-l] Simple Align, remove columns   Shawn
  • [Bioperl-l] Simple Align, remove columns   Ewan Birney
• [Bioperl-l] Smith Waterman and MPI   renata melo
  • [Bioperl-l] Smith Waterman and MPI   Aaron J Mackey
• [Bioperl-l] bond operator in genpept (follow-up)   Alex Zelensky
  • [Bioperl-l] bond operator in genpept (follow-up)   Alex Zelensky
• [Bioperl-l] Problem with Bio::Annotation   Harry Wild
  • [Bioperl-l] Problem with Bio::Annotation   Ewan Birney
  • [Bioperl-l] Revising the bioperl tutorial for release 1.2   Peter Schattner
  • [Bioperl-l] Problem with Bio::Annotation   Jason Stajich
    • [Bioperl-l] Problem with Bio::Annotation   Harry Wild
• [Bioperl-l] BLASTing BioSeq objects   James Wasmuth
  • [Bioperl-l] BLASTing BioSeq objects   Shawn
    • [Bioperl-l] BLASTing BioSeq objects   James Wasmuth
      • [Bioperl-l] BLASTing BioSeq objects   Shawn
      • [Bioperl-l] BLASTing BioSeq objects   James Wasmuth
      • [Bioperl-l] BLASTing BioSeq objects   Shawn
      • [Bioperl-l] BLASTing BioSeq objects   James Wasmuth
      • [Bioperl-l] BLASTing BioSeq objects   Jason Stajich
• [Bioperl-l] Problem with Bio::Annotation   Hilmar Lapp
• [Bioperl-l] Bio::Index question   Stephen Wang
• [Bioperl-l] LocusLink IO   Paul Boutros
• [Bioperl-l] LocusLink IO   Hilmar Lapp
  • [Bioperl-l] LocusLink IO   Paul Boutros
• [Bioperl-l] Bio::Index question   Hilmar Lapp
• [Bioperl-l] which version is installed   Jason Stajich
  • [Bioperl-l] which version is installed   Allen Day
• [Bioperl-l] LocusLink IO   Hilmar Lapp
• [Bioperl-l] which version is installed   Hilmar Lapp
  • [Bioperl-l] which version is installed   Allen Day
    • [Bioperl-l] which version is installed   Hilmar Lapp
      • [Bioperl-l] which version is installed (and links to documentation projects)   Allen Day
      • [Bioperl-l] which version is installed (and links to documentation projects)   Jason Stajich
      • [Bioperl-l] which version is installed (and links to documentation projects)   Allen Day
      • [Bioperl-l] which version is installed   Ewan Birney
• [Bioperl-l] end < start?   Estienne Swart
• [Bioperl-l] [Bioperl-guts-l] Notification: incoming/1325 (fwd)   Jason Stajich
• [Bioperl-l] sample code for Bio::Phenotype::OMIM::OMIMparser   Leonardo Kenji Shikida
  • [Bioperl-l] Re: sample code for Bio::Phenotype::OMIM::OMIMparser   Leonardo Kenji Shikida
• [Bioperl-l] sample code for Bio::Phenotype::OMIM::OMIMparser   Hilmar Lapp
• [Bioperl-l] sample code for Bio::Phenotype::OMIM::OMIMparser   Chris Zmasek
• [Bioperl-l] List summaries   Nathan Torkington
  • [Bioperl-l] List Summary for Dec 2-8 2002   Nathan Torkington
• [Bioperl-l] Re: List summaries   Kutbuddin Doctor
  • [Bioperl-l] Re: List summaries   Nathan Torkington
  • [Bioperl-l] Re: List summaries   Ewan Birney
• [Bioperl-l] documentation changes   Allen Day
  • [Bioperl-l] documentation changes   Peter Schattner
    • [Bioperl-l] documentation changes   Ewan Birney
• [Bioperl-l] BioGraphics   soumyadeep nandi
  • [Bioperl-l] a littlet bit inconsistency in Bio::SeqFeature::Generic   Xiao Juguang
    • [Bioperl-l] a littlet bit inconsistency in Bio::SeqFeature::Generic   Hilmar Lapp
      • [Bioperl-l] a littlet bit inconsistency in Bio::SeqFeature::Generic   Xiao Juguang
      • [Bioperl-l] a littlet bit inconsistency in Bio::SeqFeature::Generic   Mark Wilkinson
  • [Bioperl-l] BioGraphics   Lincoln Stein
• [Bioperl-l] Old documentation   Michael Muratet
• [Bioperl-l] Potential Bug assignments:   Ewan Birney
  • [Bioperl-l] Potential Bug assignments:   Lincoln Stein
    • [Bioperl-l] Potential Bug assignments:   Ewan Birney
      • [Bioperl-l] Potential Bug assignments:   Lincoln Stein
  • [Bioperl-l] Potential Bug assignments:   Peter Schattner
  • [Bioperl-l] Parsing sequence records in memory   Peter Schattner
    • [Bioperl-l] Parsing sequence records in memory   Ewan Birney
      • [Bioperl-l] Parsing sequence records in memory   Jason Stajich
• [Bioperl-l] Sending Accession Numbers to Blast Server   Agrin, Nathan
  • [Bioperl-l] Sending Accession Numbers to Blast Server   Jason Stajich
• [Bioperl-l] How good is Bio::Assembly::IO::ace ?   Lu, Hong
  • [Bioperl-l] How good is Bio::Assembly::IO::ace ?   Jason Stajich
  • [Bioperl-l] How good is Bio::Assembly::IO::ace ?   Robson Francisco de Souza
  • [Bioperl-l] How good is Bio::Assembly::IO::ace ?   Ewan Birney
• [Bioperl-l] Bio::Tools::Run::StandAloneBlast temporary file   Marc Logghe
• [Bioperl-l] Windows Testing   Paul Boutros
  • [Bioperl-l] Windows Testing   Ewan Birney
• [Bioperl-l] Should be simple accession number script, but it's not.   Agrin, Nathan
  • [Bioperl-l] Should be simple accession number script, but it's not.   Ewan Birney
• [Bioperl-l] Should be simple accession number script, but it's not.   Jamie Hatfield
  • [Bioperl-l] Should be simple accession number script, but it's not.   Jason Stajich
    • [Bioperl-l] Should be simple accession number script, but it's not.   Jamie Hatfield
      • [Bioperl-l] Should be simple accession number script, but it's not.   Lincoln Stein
• [Bioperl-l] Should be simple accession number script, but it' s not.   Marc Logghe
  • [Bioperl-l] Should be simple accession number script, but it' s not.   Lincoln Stein
• [Bioperl-l] This may help someone install bioperl   Pierre Far
• [Bioperl-l] Makefile; Funkiness with _rearrange issues and - on alignments   Ewan Birney
  • [Bioperl-l] Makefile; Funkiness with _rearrange issues and - on alignments   Lincoln Stein
  • [Bioperl-l] Makefile; Funkiness with _rearrange issues and - on alignments   Hilmar Lapp
    • [Bioperl-l] Makefile; Funkiness with _rearrange issues and - on alignments   Aaron J Mackey
      • [Bioperl-l] Makefile; Funkiness with _rearrange issues and - on alignments   Ewan Birney
      • [Bioperl-l] Makefile; Funkiness with _rearrange issues and - on alignments   Aaron J Mackey
• [Bioperl-l] All tests pass   Ewan Birney
• [Bioperl-l] Parsing sequence records in memory   Marc Logghe
• [Bioperl-l] All tests pass   Paul Boutros
  • [Bioperl-l] All tests pass   Jason Stajich
    • [Bioperl-l] All tests pass   Paul Boutros
    • [Bioperl-l] All tests pass   Ewan Birney
  • [Bioperl-l] All tests pass   Jason Stajich
• [Bioperl-l] Root DESTROY flip; All tests pass   Ewan Birney
  • [Bioperl-l] Root DESTROY flip; All tests pass   Lincoln Stein
    • [Bioperl-l] Query re segementation error from Bio::Index::Fasta   Peter Schattner
      • [Bioperl-l] Query re segementation error from Bio::Index::Fasta   Jason Stajich
      • [Bioperl-l] Query re segementation error from Bio::Index::Fasta   Lincoln Stein
      • [Bioperl-l] Query re segementation error from Bio::Index::Fasta   Peter Schattner
• [Bioperl-l] changes in standaloneblast   Phillip Lord
  • [Bioperl-l] changes in standaloneblast   Jason Stajich
    • [Bioperl-l] changes in standaloneblast   Phillip Lord
    • [Bioperl-l] help extracting CDS   Pedro Antonio Reche
      • [Bioperl-l] help extracting CDS   Jason Stajich
      • [Bioperl-l] Unsubscribe?   Joao Magalhaes
      • [Bioperl-l] Unsubscribe?   David Messina
      • [Bioperl-l] Re: help extracting CDS   Pedro Antonio Reche
      • [Bioperl-l] Re: help extracting CDS   Jason Stajich
      • [Bioperl-l] Re: help extracting CDS   Rob Edwards
      • [Bioperl-l] Re: help extracting CDS   Hilmar Lapp
      • [Bioperl-l] Re: help extracting CDS   Hilmar Lapp
• [Bioperl-l] List summary: Dec 9-15, 2002   Nathan Torkington
• [Bioperl-l] List summary: Dec 9-15, 2002   Hilmar Lapp
  • [Bioperl-l] List summary: Dec 9-15, 2002   Elia Stupka
    • [Bioperl-l] List summary: Dec 9-15, 2002   Xiao Juguang
      • [Bioperl-l] List summary: Dec 9-15, 2002   Jason Stajich
      • [Bioperl-l] desc/description   Hilmar Lapp
      • [Bioperl-l] List summary: Dec 9-15, 2002   Hilmar Lapp
• [Bioperl-l] [Bioperl-guts-l] [Bug 1355] Segmentation error from Bio::Index::Fasta (fwd)   Jason Stajich
• [Bioperl-l] Representation of phylogenetic trees   Jutta Buschbom
• [Bioperl-l] Representation of phylogenetic trees   Marc Logghe
  • [Bioperl-l] Representation of phylogenetic trees   Jason Stajich
    • [Bioperl-l] Representation of phylogenetic trees   David Messina
      • [Bioperl-l] Representation of phylogenetic trees   Hilmar Lapp
      • [Bioperl-l] Representation of phylogenetic trees   Hilmar Lapp
      • [Bioperl-l] Representation of phylogenetic trees   David Messina
• [Bioperl-l] Query for parsing BLAST with BioGraphics   Soumyadeep nandi
  • [Bioperl-l] Query for parsing BLAST with BioGraphics   Lincoln Stein
• [Bioperl-l] [Bioinformatics] First Genetic Trust to build Open-Source Gene-Expression tools (fwd)   Eugen Leitl
• [Bioperl-l] Bio::SearchIO $hit->description(), only one line returned...   Martin Schenker
  • [Bioperl-l] Bio::SearchIO $hit->description(), only one line returned...   Jason Stajich
    • [Bioperl-l] Bio::SearchIO $hit->description(), only one line returned...   Ewan Birney
• [Bioperl-l] 1.2-alpha-1 tar file built   Ewan Birney
  • [Bioperl-l] 1.2-alpha-1 tar file built   Chris Dagdigian
• [Bioperl-l] removing duplicate fasta records   Amit Indap <indapa@cs.arizona.edu>
  • [Bioperl-l] removing duplicate fasta records   Lincoln Stein
• [Bioperl-l] removing duplicate fasta records   nkuipers
• [Bioperl-l] removing duplicate fasta records   Marc Logghe
• [Bioperl-l] removing duplicate fasta records   Jonathan Epstein
  • [Bioperl-l] removing duplicate fasta records   Paul Gordon
    • [Bioperl-l] removing duplicate fasta records   Ewan Birney
      • [Bioperl-l] Re: removing duplicate fasta records   Michal Kurowski
      • [Bioperl-l] Re: removing duplicate fasta records   Lincoln Stein
      • [Bioperl-l] Re: removing duplicate fasta records   Ewan Birney
      • [Bioperl-l] removing duplicate fasta records   James Wasmuth
      • [Bioperl-l] Now very OT: removing duplicate fasta records   Sam Griffiths-Jones
      • [Bioperl-l] Now very OT: removing duplicate fasta records   Ewan Birney
• [Bioperl-l] removing duplicate fasta records   Paul Boutros
• [Bioperl-l] XML::Writer test seg fault   Chester Langin
  • [Bioperl-l] XML::Writer test seg fault   Jason Stajich
  • [Bioperl-l] XML::Writer test seg fault   Robin Berjon
• [Bioperl-l] Ace failure   Chester Langin
  • [Bioperl-l] Ace failure   Lincoln Stein
    • [Bioperl-l] Ace failure   Ewan Birney
      • [Bioperl-l] Ace failure   Chris Dagdigian
      • [Bioperl-l] Ace failure   Jonathan Epstein
      • [Bioperl-l] Ace failure   Lincoln Stein
• [Bioperl-l] Representation of phylogenetic trees   Jutta Buschbom
• [Bioperl-l] Removing duplicate FASTA record one-liners   William R.Pearson
  • [Bioperl-l] Removing duplicate FASTA record one-liners   Paul Gordon
    • [Bioperl-l] Removing duplicate FASTA record one-liners   Lincoln Stein
• [Bioperl-l] [Bioinformatics] iPod and A/G BLAST (fwd)   Eugen Leitl
  • [Bioperl-l] [Bioinformatics] iPod and A/G BLAST (fwd)   Aaron J Mackey
  • [Bioperl-l] [Bioinformatics] iPod and A/G BLAST (fwd)   Hilmar Lapp
• [Bioperl-l] installing Bio::DB::GFF   Chester Langin
  • [Bioperl-l] installing Bio::DB::GFF   Jason Stajich
• [Bioperl-l] What is a Bioinformatics API?   Chester Langin
• Bundle::BioPerl under cygwin Was: [Bioperl-l] Ace failure   Nash, John
• [Bioperl-l] Bptutorial.pl   Paul Boutros
  • [Bioperl-l] Bptutorial.pl   Peter Schattner
    • [Bioperl-l] Bptutorial.pl   Paul Boutros
      • [Bioperl-l] Bptutorial.pl   Peter Schattner
      • [Bioperl-l] Bptutorial.pl   Jason Stajich
      • [Bioperl-l] Bptutorial.pl   Peter Schattner
      • [Bioperl-l] Bptutorial.pl   Jason Stajich
      • [Bioperl-l] Bptutorial.pl   Jason Stajich
      • [Bioperl-l] Bptutorial.pl   Peter Schattner
• [Bioperl-l] Newbie....   Brian Carlson
• [Bioperl-l] sequence trace index data   Chad Matsalla
  • [Bioperl-l] sequence trace index data   Ewan Birney
    • [Bioperl-l] sequence trace index data   Robson Francisco de Souza
      • [Bioperl-l] sequence trace data   Chad Matsalla
      • [Bioperl-l] sequence trace data   Robson Francisco de Souza
• [Bioperl-l] Bioperl Makefile.PL and testing   Chad Matsalla
  • [Bioperl-l] Bioperl Makefile.PL and testing   Ewan Birney
  • [Bioperl-l] Bioperl Makefile.PL and testing   Hilmar Lapp
• [Bioperl-l] Question about Bio::SearchIO behavior   Donald G. Jackson
  • [Bioperl-l] Re: Question about Bio::SearchIO behavior   Jason Stajich
• [Bioperl-l] Correct SearchIO usage   Brian Carlson
  • [Bioperl-l] Correct SearchIO usage   Jason Stajich
• [Bioperl-l] removing duplicate fasta records   Simon K. Chan
• [Bioperl-l] windows+ppm user dev needed   Jason Stajich
• [Bioperl-l] SearchIO on Blast error   Brian Carlson
  • [Bioperl-l] SearchIO on Blast error   Jason Stajich
• [Bioperl-l] SearchIO on Blast error   Brian Carlson
• [Bioperl-l] 1.2-alpha-1 tar file built   Nash, John
  • [Bioperl-l] 1.2-alpha-1 tar file built   Ewan Birney
• [Bioperl-l] Windows Testing   Paul Boutros
  • [Bioperl-l] Windows Testing   Jason Stajich
    • [Bioperl-l] Windows Testing   Paul Boutros
• [Bioperl-l] thanks to all and sundry   nkuipers
• [Bioperl-l] Make test please....   Ewan Birney
  • [Bioperl-l] Bio::Graphics off-by-one error at high magnification   Lincoln Stein
• [Bioperl-l] Parsing for Bioinformatics class with Damian Conway   Uri Guttman
  • [Bioperl-l] Parsing for Bioinformatics class with Damian Conway   Ewan Birney
• [Bioperl-l] Question - Primary_id   Ewan Birney
  • [Bioperl-l] Question - Primary_id   Hilmar Lapp
    • [Bioperl-l] Question - Primary_id   Ewan Birney
      • [Bioperl-l] Question - Primary_id   Hilmar Lapp
• [Bioperl-l] Bio::Assembly::IO::ace with CAP3 ace files   Marc Logghe
  • [Bioperl-l] Bio::Assembly::IO::ace with CAP3 ace files   Ewan Birney
    • [Bioperl-l] Bio::Assembly::IO::ace with CAP3 ace files   Robson Francisco de Souza
• Bioperl 1.2.alpha testing under cygwin. Was RE: [Bioperl-l] 1.2- alpha-1 tar file built   Nash, John
  • [Bioperl-l] Re: Bioperl 1.2.alpha testing under cygwin. Was RE: [Bioperl-l] 1.2- alpha-1 tar file built   Ewan Birney
• [Bioperl-l] Genbank/EMBL output   Alex Hudek
  • [Bioperl-l] Genbank/EMBL output   Hilmar Lapp
    • [Bioperl-l] Genbank/EMBL output   Alex Hudek
• [Bioperl-l] Happy Christmasl; More testing please!   Ewan Birney
  • [Bioperl-l] Happy Christmasl; More testing please!   Jason Stajich
    • [Bioperl-l] Happy Christmasl; More testing please!   Ewan Birney
• [Bioperl-l] RE: Bioperl 1.2.alpha testing under cygwin. Was RE: [Bioperl-l] 1.2- alpha-1 tar file built   Nash, John
• [Bioperl-l] Remote Blast   nkuipers
• [Bioperl-l] Re remote blast   nkuipers
• [Bioperl-l] Handleing OS differences   Scott Cain
  • [Bioperl-l] Handleing OS differences   Hilmar Lapp
• [Bioperl-l] mapping UniGene IDs to GO ids   Jonathan Epstein
• [Bioperl-l] Specifying restriction enzyme with cut site outside recognition sequence   Alexander Gimelbrant
  • [Bioperl-l] Specifying restriction enzyme with cut site outside recognition sequence   Steve Chervitz
• [Bioperl-l] Query for parseing Genbank files with BioGraphics   Soumyadeep nandi
• [Bioperl-l] More fixes; next 5 days   Ewan Birney
• [Bioperl-l] mapping UniGene IDs to GO ids   Paul Boutros
• [Bioperl-l] Documentation tweaks; Release Candidate 1 up   Ewan Birney
  • [Bioperl-l] Documentation tweaks; Release Candidate 1 up   Peter Schattner
    • [Bioperl-l] Documentation tweaks; Release Candidate 1 up   Ewan Birney
      • [Bioperl-l] Documentation tweaks; Release Candidate 1 up   Peter Schattner
• [Bioperl-l] bug squashing   Hilmar Lapp
  • [Bioperl-l] Re: bug squashing   Ewan Birney
• [Bioperl-l] Error from Blast   Andy Nunberg
• [Bioperl-l] RE: Bioperl 1.2.alpha testing under cygwin. Was RE: [Bioperl-l] 1.2- alpha-1 tar file built   Nash, John
  • [Bioperl-l] RE: Bioperl 1.2.alpha testing under cygwin. Was RE: [Bioperl-l] 1.2- alpha-1 tar file built   Ewan Birney
• [Bioperl-l] Remote Blast   Clement Mesdon
• [Bioperl-l] Documentation tweaks; Release Candidate 1 up   Paul Boutros
  • [Bioperl-l] Documentation tweaks; Release Candidate 1 up   Hilmar Lapp
    • [Bioperl-l] Documentation tweaks; Release Candidate 1 up   Elia Stupka
• [Bioperl-l] GenBank Parser   Drew Stewart
  • [Bioperl-l] GenBank Parser   Ewan Birney
  • [Bioperl-l] GenBank Parser   Hilmar Lapp
• [Bioperl-l] Re remote blast   Clement Mesdon
  • [Bioperl-l] Re remote blast   Ewan Birney
    • [Bioperl-l] Re bioinf books   David Messina
• [Bioperl-l] Bioperl 1.2 Released   Ewan Birney
• [Bioperl-l] Searching the mailing list archives   Kerr Wall
  • [Bioperl-l] Searching the mailing list archives   Brian Osborne

Last message date: Tue Dec 31 20:21:04 2002
Archived on: Tue Dec 31 15:23:04 2002

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