[Bioperl-l] SearchIO on Blast error
Brian Carlson
bcarlson@genetics.emory.edu
Fri, 20 Dec 2002 11:23:55 -0500
I have the following test script that I'm using to play with searchIO.
#!/usr/bin/perl
use Bio::SearchIO;
$rpt = "blast.txt";
# Get the report
$searchio = new Bio::SearchIO ('-format' => 'blast',
'-file' => $rpt);
$result = $in->next_result;
I'm getting the following error:
Can't call method "next_result" on an undefined value at line...
Could someone email me a test blast file that I can work with to verify that my file doesn't have a format problem, or is this a BioPerl installation issue?
Thanks,
Brian