October 2006 Archives by author

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Starting: Sun Oct 1 17:05:25 UTC 2006
Ending: Wed Nov 1 02:31:49 UTC 2006
Messages: 485

• [Bioperl-l] CONTIG dealing   Nikki Appleby
• [Bioperl-l] Query on tree bootstrap values   Himanshu Ardawatia
• [Bioperl-l] LocatableSeq object vs Sequence Object   Peter H. Baenziger
• [Bioperl-l] Tests involving remote databases   Sendu Bala
• [Bioperl-l] Do we need Bio::Root::Object anymore?   Sendu Bala
• [Bioperl-l] Failure to compile the CVS snapshot of bioperl-ext on AMD64   Sendu Bala
• [Bioperl-l] Failure to compile the CVS snapshot of bioperl-ext on AMD64   Sendu Bala
• [Bioperl-l] Bioperl 1.5.2 RC1   Sendu Bala
• [Bioperl-l] t/ESEFinder.t fixed on branch   Sendu Bala
• [Bioperl-l] Bioperl 1.5.2 RC1   Sendu Bala
• [Bioperl-l] Bioperl 1.5.2 RC1   Sendu Bala
• [Bioperl-l] Bioperl 1.5.2 RC1   Sendu Bala
• [Bioperl-l] Bioperl under WinXP   Sendu Bala
• [Bioperl-l] EUtilities term handling   Sendu Bala
• [Bioperl-l] EUtilities term handling   Sendu Bala
• [Bioperl-l] Bio::DB::SwissProt Error   Sendu Bala
• [Bioperl-l] EUtilities term handling   Sendu Bala
• [Bioperl-l] Bio::DB::SwissProt Error   Sendu Bala
• [Bioperl-l] EUtilities term handling   Sendu Bala
• [Bioperl-l] EUtilities term handling   Sendu Bala
• [Bioperl-l] EUtilities term handling   Sendu Bala
• [Bioperl-l] EUtilities term handling   Sendu Bala
• [Bioperl-l] EUtilities term handling   Sendu Bala
• [Bioperl-l] EUtilities term handling   Sendu Bala
• [Bioperl-l] EUtilities term handling   Sendu Bala
• [Bioperl-l] EUtilities term handling   Sendu Bala
• [Bioperl-l] EUtilities term handling   Sendu Bala
• [Bioperl-l] Sort blast file result according to evalues   Sendu Bala
• [Bioperl-l] Will 1.5.2 bugfixes propagate into next RC?   Sendu Bala
• [Bioperl-l] Analysis soap problem   Sendu Bala
• [Bioperl-l] Analysis soap problem   Sendu Bala
• [Bioperl-l] Analysis soap problem   Sendu Bala
• [Bioperl-l] Bug reports and attachments   Sendu Bala
• [Bioperl-l] No "new" method in Bio::Tool::Run::AnalysisFactor::Pise?   Sendu Bala
• [Bioperl-l] Use of Root.pm versus RootI.pm   Sendu Bala
• [Bioperl-l] Documentation typo: Bio::Search::Result::GenericResult   Sendu Bala
• [Bioperl-l] Use of Root.pm versus RootI.pm   Sendu Bala
• [Bioperl-l] Bio::WebAgent sleep warning   Sendu Bala
• [Bioperl-l] Should Bio::Tools::BPlite be deprecated?   Sendu Bala
• [Bioperl-l] Bioperl Server Reconfig   Sendu Bala
• [Bioperl-l] Swissprot problems   Sendu Bala
• [Bioperl-l] Bio::WebAgent sleep warning   Sendu Bala
• [Bioperl-l] Should Bio::Tools::BPlite be deprecated?   Sendu Bala
• [Bioperl-l] Should Bio::Tools::BPlite be deprecated?   Sendu Bala
• [Bioperl-l] Use of Root.pm versus RootI.pm   Sendu Bala
• [Bioperl-l] Bioperl 1.5.2 RC2   Sendu Bala
• [Bioperl-l] Bioperl 1.5.2 RC2   Sendu Bala
• [Bioperl-l] problems with: Bio::Tools::Run::RemoteBlast   Sendu Bala
• [Bioperl-l] Bioperl 1.5.2 RC2   Sendu Bala
• [Bioperl-l] Bioperl 1.5.2 RC2   Sendu Bala
• [Bioperl-l] Bioperl 1.5.2 RC2   Sendu Bala
• [Bioperl-l] RC2 test results on WinXP   Sendu Bala
• [Bioperl-l] RC2 test results on WinXP   Sendu Bala
• [Bioperl-l] Bioperl 1.5.2 RC2   Sendu Bala
• [Bioperl-l] test::more template   Sendu Bala
• [Bioperl-l] test::more template   Sendu Bala
• [Bioperl-l] test::more template   Sendu Bala
• [Bioperl-l] Updated Makefile.PL   Sendu Bala
• [Bioperl-l] test::more template   Sendu Bala
• [Bioperl-l] Updated Makefile.PL   Sendu Bala
• [Bioperl-l] Misspellings in Bundle::BioPerl   Sendu Bala
• [Bioperl-l] Misspellings in Bundle::BioPerl   Sendu Bala
• [Bioperl-l] short motif searches   Sendu Bala
• [Bioperl-l] Misspellings in Bundle::BioPerl   Sendu Bala
• [Bioperl-l] Misspellings in Bundle::BioPerl   Sendu Bala
• [Bioperl-l] Misspellings in Bundle::BioPerl   Sendu Bala
• [Bioperl-l] Bioperl 1.5.2 RC2   Sendu Bala
• [Bioperl-l] Misspellings in Bundle::BioPerl   Sendu Bala
• [Bioperl-l] Misspellings in Bundle::BioPerl   Sendu Bala
• [Bioperl-l] Bioperl versioning   Sendu Bala
• [Bioperl-l] Bioperl versioning   Sendu Bala
• [Bioperl-l] Bundle::BioPerl and Pre-reqs   Sendu Bala
• [Bioperl-l] Bioperl versioning   Sendu Bala
• [Bioperl-l] Bundle::BioPerl and Pre-reqs   Sendu Bala
• [Bioperl-l] Bioperl versioning   Sendu Bala
• [Bioperl-l] Bioperl versioning   Sendu Bala
• [Bioperl-l] Bioperl versioning   Sendu Bala
• [Bioperl-l] CPAN testing Service   Sendu Bala
• [Bioperl-l] Bioperl versioning   Sendu Bala
• [Bioperl-l] Subclassing Bio::Seq ? Extending Bio::Perl   Sendu Bala
• [Bioperl-l] Lagan environment variable   Sendu Bala
• [Bioperl-l] Lagan environment variable   Sendu Bala
• [Bioperl-l] Bioperl-run: Testing alignments generated externally   Sendu Bala
• [Bioperl-l] Query on tree bootstrap values   Sendu Bala
• [Bioperl-l] Query on tree bootstrap values   Sendu Bala
• [Bioperl-l] Caching sequences   Sendu Bala
• [Bioperl-l] Is it possible to parse BLAST output using IO:String?   Sendu Bala
• [Bioperl-l] Last minute changes to Bio::Graphics::FeatureBase   Sendu Bala
• [Bioperl-l] about PAML running within bioperl   Georgii A Bazykin
• [Bioperl-l] problems with: Bio::Tools::Run::RemoteBlast   Bertrand Beckert
• [Bioperl-l] Bioperl under WinXP   Gianluca De Bellis
• [Bioperl-l] Bioperl 1.5.2 RC2   Paul Boutros
• [Bioperl-l] Bioperl 1.5.2 RC2   Paul Boutros
• [Bioperl-l] Bioperl 1.5.2 RC2   Paul Boutros
• [Bioperl-l] ClustalW alignment and Bioperl::Run module   Kevin Brown
• [Bioperl-l] Analysis soap problem   Kevin Brown
• [Bioperl-l] Bio::SeqIO, genbank -> fasta, protein only?   Kevin Brown
• [Bioperl-l] Blast information   Kevin Brown
• [Bioperl-l] Blast information   Kevin Brown
• [Bioperl-l] bioperl1.5 and GD2.35   Kevin Brown
• [Bioperl-l] using nfreeze instead of freeze in Bio::SeqFeature::Store   Cook, Malcolm
• [Bioperl-l] using nfreeze instead of freeze in Bio::SeqFeature::Store   Cook, Malcolm
• [Bioperl-l] need help urgently   Jonathan Crabtree
• [Bioperl-l] BioPerl Deobfuscator updated   Mauricio Herrera Cuadra
• [Bioperl-l] BioPerl Deobfuscator updated   Mauricio Herrera Cuadra
• [Bioperl-l] Bug reports and attachments   Mauricio Herrera Cuadra
• [Bioperl-l] Bioperl Server Reconfig   Mauricio Herrera Cuadra
• [Bioperl-l] Bioperl Server Reconfig   Mauricio Herrera Cuadra
• [Bioperl-l] Bioperl Server Reconfig   Mauricio Herrera Cuadra
• [Bioperl-l] Updated Makefile.PL   Mauricio Herrera Cuadra
• [Bioperl-l] No "new" method in Bio::Tool::Run::AnalysisFactor::Pise?   Sean Davis
• [Bioperl-l] need help urgently   Sean Davis
• [Bioperl-l] Accessing GO through MYSQL?   Sean Davis
• [Bioperl-l] GO annotations   Davis, Sean (NIH/NCI) [E]
• [Bioperl-l] genbank mirror   Epstein, Jonathan A (NIH/NICHD) [E]
• [Bioperl-l] Annotation-DBLink- version numbers repeating   Erikjan
• [Bioperl-l] split location problems   Nadeem Faruque
• [Bioperl-l] Tests involving remote databases   Chris Fields
• [Bioperl-l] Error retrieving sequence from BioSQL   Chris Fields
• [Bioperl-l] Error retrieving sequence from BioSQL   Chris Fields
• [Bioperl-l] Tests involving remote databases   Chris Fields
• [Bioperl-l] Do we need Bio::Root::Object anymore?   Chris Fields
• [Bioperl-l] Failure to compile the CVS snapshot of bioperl-exton AMD64   Chris Fields
• [Bioperl-l] Do we need Bio::Root::Object anymore?   Chris Fields
• [Bioperl-l] Blast parser.   Chris Fields
• [Bioperl-l] Do we need Bio::Root::Object anymore?   Chris Fields
• [Bioperl-l] Do we need Bio::Root::Object anymore?   Chris Fields
• [Bioperl-l] Bioperl 1.5.2 RC1   Chris Fields
• [Bioperl-l] Bioperl 1.5.2 RC1   Chris Fields
• [Bioperl-l] Bioperl 1.5.2 RC1   Chris Fields
• [Bioperl-l] Use of Root.pm versus RootI.pm   Chris Fields
• [Bioperl-l] Use of Root.pm versus RootI.pm   Chris Fields
• [Bioperl-l] Bioperl under WinXP   Chris Fields
• [Bioperl-l] Use of Root.pm versus RootI.pm   Chris Fields
• [Bioperl-l] Bio::DB::SwissProt Error   Chris Fields
• [Bioperl-l] EUtilities term handling   Chris Fields
• [Bioperl-l] EUtilities term handling   Chris Fields
• [Bioperl-l] EUtilities term handling   Chris Fields
• [Bioperl-l] EUtilities term handling   Chris Fields
• [Bioperl-l] EUtilities term handling   Chris Fields
• [Bioperl-l] EUtilities term handling   Chris Fields
• [Bioperl-l] EUtilities term handling   Chris Fields
• [Bioperl-l] Eutilities Batch   Chris Fields
• [Bioperl-l] EUtilities term handling   Chris Fields
• [Bioperl-l] Eutilities Batch   Chris Fields
• [Bioperl-l] EUtilities term handling   Chris Fields
• [Bioperl-l] EUtilities term handling   Chris Fields
• [Bioperl-l] EUtilities term handling   Chris Fields
• [Bioperl-l] Sort blast file result according to evalues   Chris Fields
• [Bioperl-l] Clean-up of Bio::Root::IO   Chris Fields
• [Bioperl-l] Sort blast file result according to evalues   Chris Fields
• [Bioperl-l] Analysis soap problem   Chris Fields
• [Bioperl-l] Analysis soap problem   Chris Fields
• [Bioperl-l] Analysis soap problem   Chris Fields
• [Bioperl-l] Bug reports and attachments   Chris Fields
• [Bioperl-l] Multiple packages in the one .pm file   Chris Fields
• [Bioperl-l] Multiple packages in the one .pm file   Chris Fields
• [Bioperl-l] No "new" method in Bio::Tool::Run::AnalysisFactor::Pise?   Chris Fields
• [Bioperl-l] Multiple packages in the one .pm file   Chris Fields
• [Bioperl-l] Use of Root.pm versus RootI.pm   Chris Fields
• [Bioperl-l] hickup in SimpleAlign remove_gaps method   Chris Fields
• [Bioperl-l] Bio::SeqIO, genbank -> fasta, protein only?   Chris Fields
• [Bioperl-l] no_residues test in SimpleAlign.t   Chris Fields
• [Bioperl-l] Bio::WebAgent sleep warning   Chris Fields
• [Bioperl-l] Should Bio::Tools::BPlite be deprecated?   Chris Fields
• [Bioperl-l] Bioperl Server Reconfig   Chris Fields
• [Bioperl-l] Use of Root.pm versus RootI.pm   Chris Fields
• [Bioperl-l] Bio::Location::Split   Chris Fields
• [Bioperl-l] Swissprot problems   Chris Fields
• [Bioperl-l] Bio::DB::SwissProt Problem   Chris Fields
• [Bioperl-l] SwissProt Down   Chris Fields
• [Bioperl-l] Should Bio::Tools::BPlite be deprecated?   Chris Fields
• [Bioperl-l] Bio::Location::Split   Chris Fields
• [Bioperl-l] split location problems   Chris Fields
• [Bioperl-l] Should Bio::Tools::BPlite be deprecated?   Chris Fields
• [Bioperl-l] INSTALL and INSTALL.WIN   Chris Fields
• [Bioperl-l] INSTALL and INSTALL.WIN   Chris Fields
• [Bioperl-l] Should Bio::Tools::BPlite be deprecated?   Chris Fields
• [Bioperl-l] INSTALL and INSTALL.WIN   Chris Fields
• [Bioperl-l] INSTALL and INSTALL.WIN   Chris Fields
• [Bioperl-l] Bioperl 1.5.2 RC2   Chris Fields
• [Bioperl-l] INSTALL and INSTALL.WIN   Chris Fields
• [Bioperl-l] Bioperl 1.5.2 RC2   Chris Fields
• [Bioperl-l] Bioperl 1.5.2 RC2   Chris Fields
• [Bioperl-l] split location problems   Chris Fields
• [Bioperl-l] Annotation-DBLink- version numbers repeating   Chris Fields
• [Bioperl-l] Bioperl 1.5.2 RC2   Chris Fields
• [Bioperl-l] X.Y Fuzzy locations no longer supported in GenBank/EMBL/DDBJ   Chris Fields
• [Bioperl-l] RC2 test results on WinXP   Chris Fields
• [Bioperl-l] Bioperl 1.5.2 RC2   Chris Fields
• [Bioperl-l] X.Y Fuzzy locations no longer supported in GenBank/EMBL/DDBJ   Chris Fields
• [Bioperl-l] X.Y Fuzzy locations no longer supported in GenBank/EMBL/DDBJ   Chris Fields
• [Bioperl-l] Bioperl 1.5.2 RC2   Chris Fields
• [Bioperl-l] Bioperl 1.5.2 RC2   Chris Fields
• [Bioperl-l] CONTIG dealing   Chris Fields
• [Bioperl-l] Bioperl 1.5.2 RC2   Chris Fields
• [Bioperl-l] test::more template   Chris Fields
• [Bioperl-l] Annotation-DBLink- version numbers repeating   Chris Fields
• [Bioperl-l] test::more template   Chris Fields
• [Bioperl-l] Annotation-DBLink- version numbers repeating   Chris Fields
• [Bioperl-l] Annotation-DBLink- version numbers repeating   Chris Fields
• [Bioperl-l] bioperl-run executable   Chris Fields
• [Bioperl-l] Annotation-DBLink- version numbers repeating   Chris Fields
• [Bioperl-l] test::more template   Chris Fields
• [Bioperl-l] Prabu Raja sent you this link   Chris Fields
• [Bioperl-l] test::more template   Chris Fields
• [Bioperl-l] Updated Makefile.PL   Chris Fields
• [Bioperl-l] test::more template   Chris Fields
• [Bioperl-l] Error retrieving sequence from BioSQL   Chris Fields
• [Bioperl-l] Submission proposal: ABIF module   Chris Fields
• [Bioperl-l] Updated Makefile.PL   Chris Fields
• [Bioperl-l] Submission proposal: ABIF module   Chris Fields
• [Bioperl-l] Misspellings in Bundle::BioPerl   Chris Fields
• [Bioperl-l] Misspellings in Bundle::BioPerl   Chris Fields
• [Bioperl-l] Misspellings in Bundle::BioPerl   Chris Fields
• [Bioperl-l] Bioperl versioning   Chris Fields
• [Bioperl-l] Bundle::BioPerl and Pre-reqs   Chris Fields
• [Bioperl-l] Bioperl versioning   Chris Fields
• [Bioperl-l] Bundle::BioPerl and Pre-reqs   Chris Fields
• [Bioperl-l] Bundle::BioPerl and Pre-reqs   Chris Fields
• [Bioperl-l] Error retrieving sequence from BioSQL   Chris Fields
• [Bioperl-l] Error retrieving sequence from BioSQL   Chris Fields
• [Bioperl-l] Bioperl installation under Windows   Chris Fields
• [Bioperl-l] Bioperl versioning   Chris Fields
• [Bioperl-l] Bioperl versioning   Chris Fields
• [Bioperl-l] Bioperl versioning   Chris Fields
• [Bioperl-l] blastxml format   Chris Fields
• [Bioperl-l] blastxml format   Chris Fields
• [Bioperl-l] Bio::Restriction::Enzyme   Chris Fields
• [Bioperl-l] Bioperl-run: Testing alignments generated externally   Chris Fields
• [Bioperl-l] Bioperl-run: Testing alignments generated externally   Chris Fields
• [Bioperl-l] Caching sequences   Chris Fields
• [Bioperl-l] Bio::Restriction::Enzyme   Chris Fields
• [Bioperl-l] StandAloneFasta.t bioperl-run tests   Chris Fields
• [Bioperl-l] Rfam/Pfam annotations and SimpleAlign   Chris Fields
• [Bioperl-l] Rfam/Pfam annotations and SimpleAlign   Chris Fields
• [Bioperl-l] Rfam/Pfam annotations and SimpleAlign   Chris Fields
• [Bioperl-l] PAML   Chris Fields
• [Bioperl-l] PAML   Chris Fields
• [Bioperl-l] Bio::Restriction::Analysis::fragments() memory usage   Chris Fields
• [Bioperl-l] bptutorial.pl 0   Chris Fields
• [Bioperl-l] Rfam/Pfam annotations and SimpleAlign   Chris Fields
• [Bioperl-l] Rfam/Pfam annotations and SimpleAlign   Chris Fields
• [Bioperl-l] Bio::DB::Fasta::get_Seq_by_id()   Chris Fields
• [Bioperl-l] AnnotatableI tag methods, was Rfam/Pfam annotations and SimpleAlign   Chris Fields
• [Bioperl-l] Is it possible to parse BLAST output using IO:String?   Ryan Golhar
• [Bioperl-l] Is it possible to parse BLAST output using IO:String?   Ryan Golhar
• [Bioperl-l] Is it possible to parse BLAST output using IO:String?   Ryan Golhar
• [Bioperl-l] Bioperl Server Reconfig   Nathan Haigh
• [Bioperl-l] Bioperl Server Reconfig   Nathan Haigh
• [Bioperl-l] Bioperl Server Reconfig   Nathan Haigh
• [Bioperl-l] RC2 test results on WinXP   Nathan Haigh
• [Bioperl-l] Bioperl 1.5.2 RC2   Nathan Haigh
• [Bioperl-l] RC2 test results on WinXP   Nathan Haigh
• [Bioperl-l] Bioperl 1.5.2 RC2   Nathan Haigh
• [Bioperl-l] test::more template   Nathan Haigh
• [Bioperl-l] Bioperl 1.5.2 RC2   Nathan Haigh
• [Bioperl-l] test::more template   Nathan Haigh
• [Bioperl-l] test::more template   Nathan Haigh
• [Bioperl-l] test::more template   Nathan Haigh
• [Bioperl-l] test::more template   Nathan Haigh
• [Bioperl-l] bioperl-run executable   Nathan Haigh
• [Bioperl-l] bioperl-run executable   Nathan Haigh
• [Bioperl-l] test::more template   Nathan Haigh
• [Bioperl-l] test::more template   Nathan Haigh
• [Bioperl-l] Bioperl versioning   Nathan Haigh
• [Bioperl-l] Bioperl versioning   Nathan Haigh
• [Bioperl-l] Bioperl versioning   Nathan Haigh
• [Bioperl-l] Bioperl versioning   Nathan Haigh
• [Bioperl-l] More extensive Bioperl-run 1.5.2RC2 tests   Nathan Haigh
• [Bioperl-l] Bioperl-run: Testing alignments generated externally   Nathan Haigh
• [Bioperl-l] Bioperl-run: Testing alignments generated externally   Nathan Haigh
• [Bioperl-l] Bioperl-run: Testing alignments generated externally   Nathan Haigh
• [Bioperl-l] Bio::Restriction::Enzyme   Nathan Haigh
• [Bioperl-l] Bio::Restriction::Enzyme   Nathan Haigh
• [Bioperl-l] about retreive alinged sequence   Nathan S. Haigh
• [Bioperl-l] INSTALL and INSTALL.WIN   Nathan S. Haigh
• [Bioperl-l] INSTALL and INSTALL.WIN   Nathan S. Haigh
• [Bioperl-l] INSTALL and INSTALL.WIN   Nathan S. Haigh
• [Bioperl-l] INSTALL and INSTALL.WIN   Nathan S. Haigh
• [Bioperl-l] [Fwd: Re: Bundle::BioPerl]   Nathan S. Haigh
• [Bioperl-l] Bioperl 1.5.2 RC2   Nathan S. Haigh
• [Bioperl-l] bioperl-run t/EMBOSS.t   Nathan S. Haigh
• [Bioperl-l] bioperl-run t/EMBOSS.t   Nathan S. Haigh
• [Bioperl-l] test::more template   Nathan S. Haigh
• [Bioperl-l] Updated Makefile.PL   Nathan S. Haigh
• [Bioperl-l] Updated Makefile.PL   Nathan S. Haigh
• [Bioperl-l] Misspellings in Bundle::BioPerl   Nathan S. Haigh
• [Bioperl-l] Misspellings in Bundle::BioPerl   Nathan S. Haigh
• [Bioperl-l] Misspellings in Bundle::BioPerl   Nathan S. Haigh
• [Bioperl-l] Misspellings in Bundle::BioPerl   Nathan S. Haigh
• [Bioperl-l] Misspellings in Bundle::BioPerl   Nathan S. Haigh
• [Bioperl-l] Misspellings in Bundle::BioPerl   Nathan S. Haigh
• [Bioperl-l] Bioperl versioning   Nathan S. Haigh
• [Bioperl-l] Bundle::BioPerl and Pre-reqs   Nathan S. Haigh
• [Bioperl-l] Bundle::BioPerl and Pre-reqs   Nathan S. Haigh
• [Bioperl-l] Bioperl versioning   Nathan S. Haigh
• [Bioperl-l] CPAN testing Service   Nathan S. Haigh
• [Bioperl-l] Misspellings in Bundle::BioPerl   Nathan S. Haigh
• [Bioperl-l] Lagan environment variable   Nathan S. Haigh
• [Bioperl-l] Lagan environment variable   Nathan S. Haigh
• [Bioperl-l] Bio::Restriction::Enzyme   Nathan S. Haigh
• [Bioperl-l] Bio::Restriction::Enzyme   Nathan S. Haigh
• [Bioperl-l] Bioperl-run: Testing alignments generated externally   Nathan S. Haigh
• [Bioperl-l] Query on tree bootstrap values   Nathan S. Haigh
• [Bioperl-l] Query on tree bootstrap values   Nathan S. Haigh
• [Bioperl-l] Caching sequences   Nathan S. Haigh
• [Bioperl-l] Bio::Restriction::Enzyme   Nathan S. Haigh
• [Bioperl-l] Bio::Restriction::Analysis::fragments() memory usage   Nathan S. Haigh
• [Bioperl-l] Caching sequences   Nathan S. Haigh
• [Bioperl-l] Bio::Restriction::Analysis::fragments() memory usage   Nathan S. Haigh
• [Bioperl-l] Bio::DB::Fasta::get_Seq_by_id()   Nathan S. Haigh
• [Bioperl-l] Misspellings in Bundle::BioPerl   Conrad Halling
• [Bioperl-l] Misspellings in Bundle::BioPerl   Conrad Halling
• [Bioperl-l] Misspellings in Bundle::BioPerl   Conrad Halling
• [Bioperl-l] Bio::Restriction::Analysis::fragments() memory usage   Conrad Halling
• [Bioperl-l] Documentation typo: Bio::Search::Result::GenericResult   Jay Hannah
• [Bioperl-l] Documentation typo: Bio::Search::Result::GenericResult   Jay Hannah
• [Bioperl-l] Bio::SeqIO, genbank -> fasta, protein only?   Jay Hannah
• [Bioperl-l] Bio::SeqIO, genbank -> fasta, protein only?   Jay Hannah
• [Bioperl-l] Bio::SeqIO, genbank -> fasta, protein only?   Jay Hannah
• [Bioperl-l] Bio::SeqIO::scf header/comments handling   Nancy Hansen
• [Bioperl-l] about retreive alinged sequence   zhuocheng Hou
• [Bioperl-l] Misspellings in Bundle::BioPerl   Dave Howorth
• [Bioperl-l] Bioperl versioning   Dave Howorth
• [Bioperl-l] bioperl-network warnings when loading the DIP dataset   Florin Iucha
• [Bioperl-l] Failure to compile the CVS snapshot of bioperl-ext on AMD64   Florin Iucha
• [Bioperl-l] Failure to compile the CVS snapshot of bioperl-ext on AMD64   Florin Iucha
• [Bioperl-l] Variable scope   Florin Iucha
• [Bioperl-l] Bioperl 1.5.2 RC1   Florin Iucha
• [Bioperl-l] Bioperl 1.5.2 RC1   Florin Iucha
• [Bioperl-l] Bioperl installation under Windows   Pablo Ivan
• [Bioperl-l] Error retrieving sequence from BioSQL   Seth Johnson
• [Bioperl-l] Error retrieving sequence from BioSQL   Seth Johnson
• [Bioperl-l] Error retrieving sequence from BioSQL   Seth Johnson
• [Bioperl-l] Bio::Location::Split   Amir Karger
• [Bioperl-l] Bio::Location::Split   Amir Karger
• [Bioperl-l] split location problems   Amir Karger
• [Bioperl-l] Blast parser.   JK (Jesper Agerbo Krogh)
• [Bioperl-l] Subclassing Bio::Seq ? Extending Bio::Perl   JK (Jesper Agerbo Krogh)
• [Bioperl-l] Keeping references around in the objects?   JK (Jesper Agerbo Krogh)
• [Bioperl-l] Subclassing Bio::Seq ? Extending Bio::Perl   JK (Jesper Agerbo Krogh)
• [Bioperl-l] Subclassing Bio::Seq ? Extending Bio::Perl   JK (Jesper Agerbo Krogh)
• [Bioperl-l] Bio::DB::SeqFeature   Daniel Lang
• [Bioperl-l] genbank mirror   Carlo Lapid
• [Bioperl-l] Use of Root.pm versus RootI.pm   Hilmar Lapp
• [Bioperl-l] Use of Root.pm versus RootI.pm   Hilmar Lapp
• [Bioperl-l] Clean-up of Bio::Root::IO   Hilmar Lapp
• [Bioperl-l] EUtilities term handling   Hilmar Lapp
• [Bioperl-l] EUtilities term handling   Hilmar Lapp
• [Bioperl-l] EUtilities term handling   Hilmar Lapp
• [Bioperl-l] EUtilities term handling   Hilmar Lapp
• [Bioperl-l] Clean-up of Bio::Root::IO   Hilmar Lapp
• [Bioperl-l] NESCent Phyloinformatics Hackathon   Hilmar Lapp
• [Bioperl-l] Use of Root.pm versus RootI.pm   Hilmar Lapp
• [Bioperl-l] Use of Root.pm versus RootI.pm   Hilmar Lapp
• [Bioperl-l] Bio::WebAgent sleep warning   Hilmar Lapp
• [Bioperl-l] Should Bio::Tools::BPlite be deprecated?   Hilmar Lapp
• [Bioperl-l] X.Y Fuzzy locations no longer supported in GenBank/EMBL/DDBJ   Hilmar Lapp
• [Bioperl-l] Bioperl 1.5.2 RC2   Hilmar Lapp
• [Bioperl-l] Annotation-DBLink- version numbers repeating   Hilmar Lapp
• [Bioperl-l] Annotation-DBLink- version numbers repeating   Hilmar Lapp
• [Bioperl-l] Updated Makefile.PL   Hilmar Lapp
• [Bioperl-l] Bioperl 1.5.2 RC2   Hilmar Lapp
• [Bioperl-l] Subclassing Bio::Seq ? Extending Bio::Perl   Hilmar Lapp
• [Bioperl-l] Subclassing Bio::Seq ? Extending Bio::Perl   Hilmar Lapp
• [Bioperl-l] Rfam/Pfam annotations and SimpleAlign   Hilmar Lapp
• [Bioperl-l] Rfam/Pfam annotations and SimpleAlign   Hilmar Lapp
• [Bioperl-l] Bio::DB::Fasta::get_Seq_by_id()   Hilmar Lapp
• [Bioperl-l] Rfam/Pfam annotations and SimpleAlign   Hilmar Lapp
• [Bioperl-l] Rfam/Pfam annotations and SimpleAlign   Hilmar Lapp
• [Bioperl-l] Bioperl 1.5.2 RC2   Niels Larsen
• [Bioperl-l] Bioperl 1.5.2 RC2   Niels Larsen
• [Bioperl-l] From EBI support re WU-Blast SOAP service   Niels Larsen
• [Bioperl-l] Use of Root.pm versus RootI.pm   Stephen Gordon Lenk
• [Bioperl-l] Perl 6 has 'roles' - may be cleanly applicable to the Root/RootI issue   Stephen Gordon Lenk
• [Bioperl-l] chromosome ideograms   Sheldon McKay
• [Bioperl-l] Accessing GO through MYSQL?   Graham Melcher
• [Bioperl-l] BioPerl Deobfuscator updated   David Messina
• [Bioperl-l] BioPerl Deobfuscator updated   David Messina
• [Bioperl-l] BioPerl Deobfuscator updated   David Messina
• [Bioperl-l] Multiple packages in the one .pm file   David Messina
• [Bioperl-l] missing documentation (request for help)   David Messina
• [Bioperl-l] Bioperl 1.5.2 RC1   Phillip San Miguel
• [Bioperl-l] BioPerl Deobfuscator updated   Phillip San Miguel
• [Bioperl-l] BioPerl Deobfuscator updated   Phillip San Miguel
• [Bioperl-l] Will 1.5.2 bugfixes propagate into next RC?   Phillip San Miguel
• [Bioperl-l] Bug reports and attachments   Phillip San Miguel
• [Bioperl-l] INSTALL and INSTALL.WIN   Barry Moore
• [Bioperl-l] INSTALL and INSTALL.WIN   Barry Moore
• [Bioperl-l] GO annotations   Olena Morozova
• [Bioperl-l] ICNT2006-presents Nanotechnology Workforce Development   International Association of Nanotechnology
• [Bioperl-l] bioperl-network warnings when loading the DIP dataset   Brian Osborne
• [Bioperl-l] bioperl-network warnings when loading the DIP dataset   Brian Osborne
• [Bioperl-l] Failure to compile the CVS snapshot of bioperl-ext on AMD64   Brian Osborne
• [Bioperl-l] Do we need Bio::Root::Object anymore?   Brian Osborne
• [Bioperl-l] bioperl-network warnings when loading the DIP dataset   Brian Osborne
• [Bioperl-l] genbank mirror   Brian Osborne
• [Bioperl-l] genbank mirror   Brian Osborne
• [Bioperl-l] Multiple packages in the one .pm file   Brian Osborne
• [Bioperl-l] Documentation typo: Bio::Search::Result::GenericResult   Brian Osborne
• [Bioperl-l] Bio::SeqIO, genbank -> fasta, protein only?   Brian Osborne
• [Bioperl-l] Bio::SeqIO, genbank -> fasta, protein only?   Brian Osborne
• [Bioperl-l] Bio::SeqIO, genbank -> fasta, protein only?   Brian Osborne
• [Bioperl-l] Should Bio::Tools::BPlite be deprecated?   Brian Osborne
• [Bioperl-l] Should Bio::Tools::BPlite be deprecated?   Brian Osborne
• [Bioperl-l] Should Bio::Tools::BPlite be deprecated?   Brian Osborne
• [Bioperl-l] Should Bio::Tools::BPlite be deprecated?   Brian Osborne
• [Bioperl-l] Should Bio::Tools::BPlite be deprecated?   Brian Osborne
• [Bioperl-l] INSTALL and INSTALL.WIN   Brian Osborne
• [Bioperl-l] X.Y Fuzzy locations no longer supported in GenBank/EMBL/DDBJ   Brian Osborne
• [Bioperl-l] X.Y Fuzzy locations no longer supported in GenBank/EMBL/DDBJ   Brian Osborne
• [Bioperl-l] Blast information   Brian Osborne
• [Bioperl-l] LocatableSeq object vs Sequence Object   Brian Osborne
• [Bioperl-l] bioperl-run t/EMBOSS.t   Brian Osborne
• [Bioperl-l] Bio::Restriction::Enzyme   Brian Osborne
• [Bioperl-l] Bio::Restriction::Enzyme   Brian Osborne
• [Bioperl-l] Rfam/Pfam annotations and SimpleAlign   Brian Osborne
• [Bioperl-l] Bio::SeqIO::scf header/comments handling   Brian Osborne
• [Bioperl-l] Bio::DB::GFF::Util::Binning   Keith Player
• [Bioperl-l] Prabu Raja sent you this link   Prabu Raja
• [Bioperl-l] PAML   Eric Ross
• [Bioperl-l] PAML   Eric Ross
• [Bioperl-l] Bioperl-run: Testing alignments generated externally   Remo Sanges
• [Bioperl-l] regarding polyphred output   Sayali
• [Bioperl-l] Do we need Bio::Root::Object anymore?   Torsten Seemann
• [Bioperl-l] Use of Root.pm versus RootI.pm   Torsten Seemann
• [Bioperl-l] genbank mirror   Torsten Seemann
• [Bioperl-l] Clean-up of Bio::Root::IO   Torsten Seemann
• [Bioperl-l] Clean-up of Bio::Root::IO   Torsten Seemann
• [Bioperl-l] Multiple packages in the one .pm file   Torsten Seemann
• [Bioperl-l] Use of Root.pm versus RootI.pm   Torsten Seemann
• [Bioperl-l] test::more template   Torsten Seemann
• [Bioperl-l] short motif searches   Jyoti Shah
• [Bioperl-l] No "new" method in Bio::Tool::Run::AnalysisFactor::Pise?   Adam Sjøgren
• [Bioperl-l] Do we need Bio::Root::Object anymore?   Will Spooner
• [Bioperl-l] t/ESEFinder.t fixed on branch   Jason Stajich
• [Bioperl-l] Use of Root.pm versus RootI.pm   Jason Stajich
• [Bioperl-l] tempfile cleanup   Jason Stajich
• [Bioperl-l] split location problems   Jason Stajich
• [Bioperl-l] split location problems   Jason Stajich
• [Bioperl-l] Blast information   Jason Stajich
• [Bioperl-l] Annotation-DBLink- version numbers repeating   Jason Stajich
• [Bioperl-l] Annotation-DBLink- version numbers repeating   Jason Stajich
• [Bioperl-l] Annotation-DBLink- version numbers repeating   Jason Stajich
• [Bioperl-l] bioperl-run executable   Jason Stajich
• [Bioperl-l] bioperl-run executable   Jason Stajich
• [Bioperl-l] Bioperl-run: Testing alignments generated externally   Jason Stajich
• [Bioperl-l] Caching sequences   Jason Stajich
• [Bioperl-l] Query on tree bootstrap values   Jason Stajich
• [Bioperl-l] Bio::DB::Fasta::get_Seq_by_id()   Jason Stajich
• [Bioperl-l] Is it possible to parse BLAST output using IO:String?   Jason Stajich
• [Bioperl-l] catfile and catdir   Jason Stajich
• [Bioperl-l] Rfam/Pfam annotations and SimpleAlign   Jason Stajich
• [Bioperl-l] Variable scope   Lincoln Stein
• [Bioperl-l] Bio::DB::SeqFeature   Lincoln Stein
• [Bioperl-l] Bioperl 1.5.2 RC1   Lincoln Stein
• [Bioperl-l] using nfreeze instead of freeze in Bio::SeqFeature::Store   Lincoln Stein
• [Bioperl-l] Multiple packages in the one .pm file   Lincoln Stein
• [Bioperl-l] Last minute changes to Bio::Graphics::FeatureBase   Lincoln Stein
• [Bioperl-l] Bioperl versioning   Lincoln Stein
• [Bioperl-l] Bio::DB::GFF::Util::Binning   Lincoln Stein
• [Bioperl-l] blastxml format   Massimo Ubaldi
• [Bioperl-l] blastxml format   Massimo Ubaldi
• [Bioperl-l] hickup in SimpleAlign remove_gaps method   Albert Vilella
• [Bioperl-l] no_residues test in SimpleAlign.t   Albert Vilella
• [Bioperl-l] scale branch lengths of a tree to sum 1   Albert Vilella
• [Bioperl-l] scale branch lengths of a tree to sum 1   Albert Vilella
• [Bioperl-l] PAML   Albert Vilella
• [Bioperl-l] catfile and catdir   Albert Vilella
• [Bioperl-l] Submission proposal: ABIF module   Nicola Vitacolonna
• [Bioperl-l] Submission proposal: ABIF module   Nicola Vitacolonna
• [Bioperl-l] Eutilities Batch   Bernd Web
• [Bioperl-l] Is it possible to parse BLAST output using IO:String?   Bernd Web
• [Bioperl-l] Bio::DB::SwissProt Error   Marc Weimer
• [Bioperl-l] Bio::DB::SwissProt Error   Marc Weimer
• [Bioperl-l] Bio::DB::SwissProt Problem   Marc Weimer
• [Bioperl-l] bioperl1.5 and GD2.35   Huang Yi
• [Bioperl-l] bptutorial.pl 0   Naoya Yuhki
• [Bioperl-l] problems with: Bio::Tools::Run::RemoteBlast   bertrand beckert
• [Bioperl-l] Variable scope   ende
• [Bioperl-l] No "new" method in Bio::Tool::Run::AnalysisFactor::Pise?   zhihua li
• [Bioperl-l] Sort blast file result according to evalues   deepak shingan
• [Bioperl-l] need help urgently   neeti somaiya
• [Bioperl-l] CN=Deb Groskreutz/OU=MSN/O=TWT is out of the office.   DGroskreutz at twt.com

Last message date: Wed Nov 1 02:31:49 UTC 2006
Archived on: Mon Jun 16 02:47:41 UTC 2014

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