[Bioperl-l] Bio::DB::SwissProt Error
bix at sendu.me.uk
Thu Oct 5 14:14:40 UTC 2006
Chris Fields wrote:
>>> ------------- EXCEPTION: Bio::Root::Exception -------------
>>> MSG: swissprot stream with no ID. Not swissprot in my book
> I think the error here results from Bio::SeqIO::swiss trying to parse an
> empty byte stream. Sendu, do you think that Bio::SeqIO::swiss (and
> other SeqIO parsers) should throw a more specific message for getting an
> empty byte stream? Or is it more trouble than it's worth?
Trouble wise, I've no idea without looking into it. Generally speaking
though I can say that the error message is pretty useless and I'm always
in favour of better error messages.
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