2001-April Archives by Thread

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Starting: Sun Apr 1 06:54:57 2001
Ending: Mon Apr 30 19:51:51 2001
Messages: 181

• [Bioperl-l] validate_seq() in Bio::PrimarySeq   Hilmar Lapp
• [Bioperl-l] Re: next_seq hangs it scf (PR#920)   Hilmar Lapp
  • [Bioperl-l] Re: next_seq hangs it scf (PR#920)   Jason Stajich
• [Bioperl-l] SeqIO PIR format broken   Hilmar Lapp
• [Bioperl-l] Abject apologies   David Block
• [Bioperl-l] bioperl-db -- a cautious first baby-steps   Ewan Birney
  • [Bioperl-l] bioperl-db -- a cautious first baby-steps   dblock@bioinfo.pbi.nrc.ca
• [Bioperl-l] SeqIO PIR format broken   Hilmar Lapp
• [Bioperl-l] Bio::(LiveSeq & Variation)   Heikki Lehvaslaiho
  • [Bioperl-l] Bio::(LiveSeq & Variation)   Ewan Birney
    • [Bioperl-l] Bio::(LiveSeq & Variation)   Jason Stajich
• [Bioperl-l] Bio::DB::EMBL   Heikki Lehvaslaiho
  • [Bioperl-l] Bio::DB::EMBL   Ewan Birney
    • [Bioperl-l] Bio::DB::EMBL   Heikki Lehvaslaiho
    • [Bioperl-l] Bio::DB::EMBL   Jason Stajich
      • [Bioperl-l] Bio::DB::EMBL   Hilmar Lapp
      • [Bioperl-l] Bio::DB::EMBL   Ewan Birney
      • [Bioperl-l] Bio::DB::EMBL   Rodrigo Lopez
• [Bioperl-l] Orphaning several packages   Catherine Letondal
  • [Bioperl-l] Orphaning several packages   Chad Price
• [Bioperl-l] remote ncbi blast   Jason Stajich
  • [Bioperl-l] remote ncbi blast   Jeffrey Chang
  • [Bioperl-l] remote ncbi blast   gert thijs
    • [Bioperl-l] remote ncbi blast   Jason Stajich
• [Bioperl-l] remote ncbi blast   Jonathan Epstein
• [Bioperl-l] huidziekte   Rita de Groot
• [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Mark Wilkinson
  • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Ewan Birney
    • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Hilmar Lapp
      • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Ewan Birney
      • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Hilmar Lapp
      • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   David Block
      • [Bioperl-l] ?? MOBY-DIC Meeting in Saskatchewan   Mark Wilkinson
      • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Ewan Birney
      • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Mark Wilkinson
    • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Chris Mungall
  • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Hilmar Lapp
    • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Chris Mungall
      • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Mark Wilkinson
      • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Hilmar Lapp
      • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Jeffrey Chang
      • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Jonathan Epstein
      • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   David Block
      • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Mark Wilkinson
      • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Jeffrey Chang
      • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Ewan Birney
  • [Bioperl-l] GO annotatinos in BioPerl. A tentative proposal...   Chris Mungall
• [Bioperl-l] Re: Bio::DB::EMBL   Elia Stupka
  • [Bioperl-l] Re: Bio::DB::EMBL   Rodrigo Lopez
• [Bioperl-l] Re: Perl modules for UPGMA algorithm   Heikki Lehvaslaiho
• [Bioperl-l] Bringing Bioperl annotations in-line.   Ewan Birney
  • [Bioperl-l] Bringing Bioperl annotations in-line.   Mark Wilkinson
• [Bioperl-l] Annotation proposal   Ewan Birney
  • [Bioperl-l] Annotation proposal   Mark Wilkinson
  • [Bioperl-l] Annotation proposal   Matthew Pocock
    • [Bioperl-l] Annotation proposal   Matthew Pocock
    • [Bioperl-l] Annotation proposal   Hilmar Lapp
    • [Bioperl-l] Annotation proposal   Ewan Birney
      • [Bioperl-l] Annotation proposal   Matthew Pocock
• [Bioperl-l] Source code for SW algorithm?   Simon Lin
  • [Bioperl-l] Source code for SW algorithm?   Aaron J Mackey
  • [Bioperl-l] Source code for SW algorithm?   Paul Gordon
  • [Bioperl-l] Source code for SW algorithm?   Ewan Birney
• [Bioperl-l] Genome Informatics meeting, 8-12 August   Ewan Birney
• [Bioperl-l] cvs updates   Jason Stajich
• [Bioperl-l] Bio::Tools::Run::RemoteBlast.pm   Jason Stajich
• [Bioperl-l] need subject length   Ann Loraine
  • [Bioperl-l] need subject length   Hilmar Lapp
• [Bioperl-l] BPlite: query name   Hilmar Lapp
• [Bioperl-l] what constitutes a good match?   Tania Oh
  • [Bioperl-l] what constitutes a good match?   Jeffrey Chang
• [Bioperl-l] remote blast update   Jason Stajich
• [Bioperl-l] remote blast update   Wiepert, Mathieu
  • [Bioperl-l] remote blast update   Jason Stajich
• [Bioperl-l] remote blast update   Chervitz, Steve
  • [Bioperl-l] remote blast update   Jason Stajich
  • [Bioperl-l] remote blast update   Hilmar Lapp
• [Bioperl-l] bioperl-db: It's aaaaaaliiiiiive   Ewan Birney
  • [Bioperl-l] bioperl-db: It's aaaaaaliiiiiive   Jason Stajich
    • [Bioperl-l] bioperl-db: It's aaaaaaliiiiiive   Ewan Birney
• [Bioperl-l] List   RossDA@appliedbiosystems.com
• [Bioperl-l] swiss prot   Xiangyun Wang
  • [Bioperl-l] swiss prot   Jason Stajich
    • [Bioperl-l] swiss prot   Heikki Lehvaslaiho
      • [Bioperl-l] swiss prot   Heikki Lehvaslaiho
      • [Bioperl-l] swiss prot   Heikki Lehvaslaiho
• [Bioperl-l] problems accessing cvs and ftp   Malcolm Cook
  • [Bioperl-l] problems accessing cvs and ftp   Jason Stajich
• [Bioperl-l] bioperl-db - apologies   Ewan Birney
• [Bioperl-l] Joint CSHL/Wellcome Trust meeting, 8-12 August, Hinxton   Ewan Birney
• [Bioperl-l] Bioperl-db Corba bindings.   Ewan Birney
• [Bioperl-l] Having working code in documentation   Kris Boulez
  • [Bioperl-l] Having working code in documentation   Heikki Lehvaslaiho
• [Bioperl-l] remote blast update   Chervitz, Steve
  • [Bioperl-l] remote blast update   Hilmar Lapp
• [Bioperl-l] Bioperl on MacOS X - success!   Todd Richmond
  • [Bioperl-l] Bioperl on MacOS X - success!   Jason Stajich
• [Bioperl-l] remote blast update   Chervitz, Steve
  • [Bioperl-l] remote blast update   Hilmar Lapp
• [Bioperl-l] BioPerl newbie question about exporting sub_SeqFeatures   Gosink, Mark (SEA)
  • [Bioperl-l] (no subject)   Obionor de Oliveira Nobrega
    • [Bioperl-l] (no subject)   Chad Price
  • [Bioperl-l] BioPerl newbie question about exporting sub_SeqFeatures   Hilmar Lapp
• [Bioperl-l] Re: RedHat/DBM (was Re: Bioperl volunteering)   Jason Stajich
• [Bioperl-l] BioPerl newbie question about exporting sub_SeqFe atures   Gosink, Mark (SEA)
  • [Bioperl-l] Location bug for features with sub_SeqFeatures?   Hilmar Lapp
  • [Bioperl-l] BioPerl newbie question about exporting sub_SeqFe atures   Jason Stajich
  • [Bioperl-l] BioPerl newbie question about exporting sub_SeqFe atures   Ewan Birney
    • [Bioperl-l] BioPerl newbie question about exporting sub_SeqFe atures   Jason Stajich
      • [Bioperl-l] BioPerl newbie question about exporting sub_SeqFe atures   Ewan Birney
      • [Bioperl-l] BioPerl newbie question about exporting sub_SeqFe atures   Hilmar Lapp
    • [Bioperl-l] BioPerl newbie question about exporting sub_SeqFeatures   gert thijs
• [Bioperl-l] Bio::Range   Jason Stajich
  • [Bioperl-l] Bio::Range   Ewan Birney
    • [Bioperl-l] Bio::Range   Jason Stajich
      • [Bioperl-l] Bio::Range   Ewan Birney
      • [Bioperl-l] Bio::Range   Jason Stajich
• [Bioperl-l] Re: Bio::SeqIO   Ewan Birney
• [Bioperl-l] Re: Bio::SeqIO   francis@cmmt.ubc.ca
• [Bioperl-l] BLAST dispatcher   Tu Qiang
• [Bioperl-l] BioPerl newbie question about exporting sub_SeqFe atures   Gosink, Mark (SEA)
• [Bioperl-l] FYI - Perl interfaces to XML   Michael Myers
  • [Bioperl-l] FYI - Perl interfaces to XML   Heikki Lehvaslaiho
  • [Bioperl-l] FYI - Perl interfaces to XML   Heikki Lehvaslaiho
• [Bioperl-l] RE: Bio::SeqIO   Qi, Yanping
• [Bioperl-l] bugs & fixes   Hilmar Lapp
  • [Bioperl-l] Re: bugs & fixes   Ann Loraine
• [Bioperl-l] Exceptions and Interfaces   Steve A. Chervitz
  • [Bioperl-l] Exceptions and Interfaces   Ewan Birney
• [Bioperl-l] bioperl-db improvements   Elia Stupka
• [Bioperl-l] EMBL parser   Elia Stupka
  • [Bioperl-l] EMBL parser   Ewan Birney
• [Bioperl-l] redundance program   Hilmar Lapp
• [Bioperl-l] forthcoming release schedule   Hilmar Lapp
• [Bioperl-l] Exceptions and Interfaces   Chervitz, Steve
• [Bioperl-l] Exceptions and Interfaces   Chervitz, Steve
• [Bioperl-l] Exceptions and Interfaces   Chervitz, Steve
• [Bioperl-l] unigene   Elia Stupka
• [Bioperl-l] bugs #927 and #949 (BPbl2seq, BPlite)   Hilmar Lapp
• [Bioperl-l] Re: AF165282 and Bio::DB::GenBank   Jason Stajich
  • [Bioperl-l] Re: AF165282 and Bio::DB::GenBank   Elia Stupka
    • [Bioperl-l] Re: AF165282 and Bio::DB::GenBank   Jason Stajich
• [Bioperl-l] Re: bl2seq reader chokes when no results (PR#927)   Brad Chapman
  • [Bioperl-l] Re: bl2seq reader chokes when no results (PR#927)   Hilmar Lapp
    • [Bioperl-l] Re: bl2seq reader chokes when no results (PR#927)   Brad Chapman
      • [Bioperl-l] Re: bl2seq reader chokes when no results (PR#927)   Ann Loraine
      • [Bioperl-l] Re: bl2seq reader chokes when no results (PR#927)   Hilmar Lapp
      • [Bioperl-l] Re: bl2seq reader chokes when no results (PR#927)   Jeffrey Chang
      • [Bioperl-l] Re: bl2seq reader chokes when no results (PR#927)   Hilmar Lapp
• [Bioperl-l] bug #952   Jason Stajich
  • [Bioperl-l] Re: bug #952   Elia Stupka
  • [Bioperl-l] bug #952   Heikki Lehvaslaiho
    • [Bioperl-l] bug #952   Jason Stajich
• [Bioperl-l] parsing genbank (tissue_type & notes)   Fernan Aguero
  • [Bioperl-l] parsing genbank (tissue_type & notes)   Hilmar Lapp
  • [Bioperl-l] parsing genbank (tissue_type & notes)   Elia Stupka
  • [Bioperl-l] FW: GenBank Release 123.0 Now Available   Malcolm Cook
    • [Bioperl-l] genbank locus line format change   Hilmar Lapp
• [Bioperl-l] install problems?   george
  • [Bioperl-l] install problems?   Paul Gordon
  • [Bioperl-l] install problems?   Jason Stajich
• [Bioperl-l] Split locations   Elia Stupka
  • [Bioperl-l] Split locations   Hilmar Lapp
    • [Bioperl-l] Split locations   Ewan Birney
  • [Bioperl-l] is_remote() in Location::Simple   Hilmar Lapp
    • [Bioperl-l] is_remote() in Location::Simple   Ewan Birney
      • [Bioperl-l] is_remote() in Location::Simple   Elia Stupka
      • [Bioperl-l] is_remote() in Location::Simple   Hilmar Lapp
      • [Bioperl-l] is_remote() in Location::Simple   Elia Stupka
• [Bioperl-l] t/data   Jason Stajich
  • [Bioperl-l] t/data   Hilmar Lapp
  • [Bioperl-l] t/data   Ewan Birney
  • [Bioperl-l] t/data   Jason Stajich
    • [Bioperl-l] t/data   Elia Stupka
• [Bioperl-l] [pm-help] perltidy (fwd)   Jason Stajich
• [Bioperl-l] cleanup of tempfiles   Jason Stajich
  • [Bioperl-l] cleanup of tempfiles   Heikki Lehvaslaiho
  • [Bioperl-l] cleanup of tempfiles   Ewan Birney
    • [Bioperl-l] cleanup of tempfiles   Hilmar Lapp
      • [Bioperl-l] cleanup of tempfiles   David Block
      • [Bioperl-l] cleanup of tempfiles   David Block

Last message date: Mon Apr 30 19:51:51 2001
Archived on: Mon Apr 30 14:53:22 2001

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