[Bioperl-l] BPlite: query name

Hilmar Lapp hilmarl@yahoo.com
Sun, 08 Apr 2001 14:38:57 -0700

Bug #935 is fixed thanks to Steve Lane. I see an additional
problem here, that doesn't seem to have bothered people so far
though: the query name in the report has the length added, and
this ends up in the query name:

e.g. Query=gi|1401126 (504 letters) 
leads $hsp->query->seqname() returning the full string, including
the number of letters, instead of 'gi|1401126' only.

Do people think this makes sense? Does anyone already depend on
this behaviour?

Hilmar Lapp                              email: hilmarl@yahoo.com
GNF, San Diego, Ca. 92122                phone: +1 858 812 1757