[Bioperl-l] remote blast update

Hilmar Lapp lapp@gnf.org
Fri, 13 Apr 2001 20:41:47 -0700

"Chervitz, Steve" wrote:
> I've seen Aaron's interfaces and think they're a good start. It would be
> great if your Similarity feature objects, for example, could be constructed
> based on such interfaces, and not be tied to any particular type of
> similarity search result object, as they are now.

Well, I thought they are not. If they are, I'd say it's a design bug.
What in the design did you find tied to a particular type of search
result? The SimilarityPair obviously is limited to a subject and a
query, not many subjects.


Hilmar Lapp                            email: lapp@gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757