August 2006 Archives by thread

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Starting: Tue Aug 1 02:56:45 UTC 2006
Ending: Fri Sep 1 01:11:31 UTC 2006
Messages: 454

• [Bioperl-l] $hit_object->frac_aligned_hit/$hit_object->frac_aligned_query   Andreo Beck
• [Bioperl-l] $hit_object->frac_aligned_hit/$hit_object->frac_aligned_query   Andreo Beck
  • [Bioperl-l] $hit_object->frac_aligned_hit/$hit_object->frac_aligned_query   Sendu Bala
  • [Bioperl-l] $hit_object->frac_aligned_hit/$hit_object->frac_aligned_query   Sendu Bala
    • [Bioperl-l] $hit_object->frac_aligned_hit/$hit_object->frac_aligned_query   Hilmar Lapp
      • [Bioperl-l] $hit_object->frac_aligned_hit/$hit_object->frac_aligned_query   Sendu Bala
      • [Bioperl-l] $hit_object->frac_aligned_hit/$hit_object->frac_aligned_query   Bernd Brandt
      • [Bioperl-l] $hit_object->frac_aligned_hit/$hit_object->frac_aligned_query   Sendu Bala
    • [Bioperl-l] $hit_object->frac_aligned_hit/$hit_object->frac_aligned_query   Andreo Beck
      • [Bioperl-l] $hit_object->frac_aligned_hit/$hit_object->frac_aligned_query   Sendu Bala
• [Bioperl-l] Getting sequences by base pair locations   Yuval Itan
• [Bioperl-l] Getting sequences by base pair locations   Cook, Malcolm
• [Bioperl-l] (no subject)   Andreo Beck
  • [Bioperl-l] (no subject)   Chris Fields
• [Bioperl-l] Getting sequences by base pair locations   Kevin Brown
• [Bioperl-l] Develop with perl on oracle?   杨 鹏程
• [Bioperl-l] Problem in Bio-Perl parser , while running on XML-RPC environment   deep shingan
• [Bioperl-l] Pattern finding and mismatches   staffa
  • [Bioperl-l] Pattern finding and mismatches   Michael Thon
    • [Bioperl-l] Pattern finding and mismatches   Brian Osborne
• [Bioperl-l] install DBD::mysql, can't execute mysql_config   zhihua li
  • [Bioperl-l] install DBD::mysql, can't execute mysql_config   Torsten Seemann
• [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Sendu Bala
  • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Hilmar Lapp
    • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Sendu Bala
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Sendu Bala
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Chris Fields
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Hilmar Lapp
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Sendu Bala
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Hilmar Lapp
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Sendu Bala
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Chris Fields
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Hilmar Lapp
    • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Chris Fields
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Hilmar Lapp
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Chris Fields
  • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Chris Fields
    • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Sendu Bala
  • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Sendu Bala
    • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Hilmar Lapp
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Sendu Bala
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Hilmar Lapp
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Sendu Bala
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Chris Fields
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Chris Fields
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Hilmar Lapp
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Chris Fields
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Sendu Bala
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Sendu Bala
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Hilmar Lapp
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Chris Fields
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Mauricio Herrera Cuadra
      • [Bioperl-l] Wiki Stuff, was: Bio::Species, Bio::Taxonomy::Node overhaul   Chris Fields
      • [Bioperl-l] Bio::Species, Bio::Taxonomy::Node overhaul   Chris Fields
• [Bioperl-l] FW: A bio-perl networking problem   Brian Osborne
• [Bioperl-l] t/entrezgene, t/protgraph and t/FeatureIO   Sendu Bala
  • [Bioperl-l] t/entrezgene, t/protgraph and t/FeatureIO   Hilmar Lapp
  • [Bioperl-l] t/entrezgene, t/protgraph and t/FeatureIO   Chris Fields
    • [Bioperl-l] t/entrezgene, t/protgraph and t/FeatureIO   Sendu Bala
      • [Bioperl-l] t/entrezgene, t/protgraph and t/FeatureIO   Chris Fields
    • [Bioperl-l] t/entrezgene, t/protgraph and t/FeatureIO   Brian Osborne
      • [Bioperl-l] t/entrezgene, t/protgraph and t/FeatureIO   Chris Fields
  • [Bioperl-l] t/entrezgene, t/protgraph and t/FeatureIO   Brian Osborne
• [Bioperl-l] Database Retrieval   Rick Scavetta
  • [Bioperl-l] Database Retrieval   Sean Davis
    • [Bioperl-l] Database Retrieval   Sean Davis
    • [Bioperl-l] Database Retrieval   Cui, Wenwu (NIH/NLM/NCBI) [C]
    • [Bioperl-l] Database Retrieval   Hilmar Lapp
  • [Bioperl-l] Database Retrieval   Sendu Bala
    • [Bioperl-l] Database Retrieval   Alexander Kozik
    • [Bioperl-l] Database Retrieval   Chris Fields
      • [Bioperl-l] Database Retrieval   Sean Davis
      • [Bioperl-l] Database Retrieval   Chris Fields
    • [Bioperl-l] Database Retrieval   Sean Davis
      • [Bioperl-l] Database Retrieval   Sendu Bala
      • [Bioperl-l] Database Retrieval   Sean Davis
      • [Bioperl-l] Database Retrieval   Hilmar Lapp
      • [Bioperl-l] Database Retrieval   Sendu Bala
      • [Bioperl-l] Database Retrieval   Sean Davis
      • [Bioperl-l] Database Retrieval   Sendu Bala
      • [Bioperl-l] Database Retrieval   Chris Fields
      • [Bioperl-l] Database Retrieval   Sendu Bala
      • [Bioperl-l] Database Retrieval   Chris Fields
      • [Bioperl-l] Database Retrieval   Hilmar Lapp
      • [Bioperl-l] Database Retrieval   Chris Fields
      • [Bioperl-l] Database Retrieval   Hilmar Lapp
      • [Bioperl-l] Database Retrieval   Chris Fields
      • [Bioperl-l] Database Retrieval   Sean Davis
      • [Bioperl-l] Database Retrieval   Sendu Bala
      • [Bioperl-l] Database Retrieval   Chris Fields
      • [Bioperl-l] Database Retrieval   Sendu Bala
      • [Bioperl-l] Database Retrieval   Chris Fields
      • [Bioperl-l] Database Retrieval   Hilmar Lapp
      • [Bioperl-l] Database Retrieval   Chris Fields
      • [Bioperl-l] Database Retrieval   Sendu Bala
      • [Bioperl-l] Database Retrieval   Chris Fields
      • [Bioperl-l] Database Retrieval   Sendu Bala
      • [Bioperl-l] Database Retrieval   Sean Davis
      • [Bioperl-l] Database Retrieval   Chris Fields
      • [Bioperl-l] Database Retrieval   Sean Davis
      • [Bioperl-l] Database Retrieval   Chris Fields
      • [Bioperl-l] Database Retrieval   Hilmar Lapp
      • [Bioperl-l] Database Retrieval   Sean Davis
  • [Bioperl-l] Database Retrieval   Benoit Ballester
• [Bioperl-l] Bio::DB::Fasta fails for files over 4GB   Charles Tilford
  • [Bioperl-l] Bio::DB::Fasta fails for files over 4GB   Chris Fields
    • [Bioperl-l] Bio::DB::Fasta fails for files over 4GB   Charles Tilford
      • [Bioperl-l] Bio::DB::Fasta fails for files over 4GB   Chris Fields
      • [Bioperl-l] Bio::DB::Fasta fails for files over 4GB   Charles Tilford
• [Bioperl-l] (no subject)   lalitha viswanath
  • [Bioperl-l] (no subject)   Chris Fields
• [Bioperl-l] Parsing Clustalw alignment   Amanda n/a
  • [Bioperl-l] Parsing Clustalw alignment   Sendu Bala
• [Bioperl-l] Parsing output with Clustalw.pm   Amanda n/a
• [Bioperl-l] Ideas for next Bioperl release   Chris Fields
  • [Bioperl-l] Release 1.5.2   Sendu Bala
    • [Bioperl-l] Release 1.5.2   Hilmar Lapp
      • [Bioperl-l] Release 1.5.2   Chris Fields
      • [Bioperl-l] Release 1.5.2   Mauricio Herrera Cuadra
    • [Bioperl-l] Release 1.5.2   Sendu Bala
• [Bioperl-l] t/protgraph errors - was t/entrezgene, t/protgraph and t/FeatureIO   James D. White
• [Bioperl-l] A blast result file parsing exception   deepak shingan
  • [Bioperl-l] A blast result file parsing exception   Brian Osborne
• [Bioperl-l] Wiki edits   Sendu Bala
  • [Bioperl-l] Wiki edits   Chris Fields
    • [Bioperl-l] Wiki edits   Sendu Bala
• [Bioperl-l] Bio::Tools::pSW stop codon bug?   Prachi Shah
  • [Bioperl-l] Bio::Tools::pSW stop codon bug?   Chris Fields
    • [Bioperl-l] Bio::Tools::pSW stop codon bug?   aaron.j.mackey at gsk.com
      • [Bioperl-l] Bio::Tools::pSW stop codon bug?   Chris Fields
• [Bioperl-l] UCSC database backend   Sean Davis
  • [Bioperl-l] UCSC database backend   Chris Fields
    • [Bioperl-l] UCSC database backend   Sean Davis
      • [Bioperl-l] UCSC database backend   Chris Fields
      • [Bioperl-l] UCSC database backend   Sean Davis
      • [Bioperl-l] UCSC database backend   Chris Fields
      • [Bioperl-l] UCSC database backend   Sendu Bala
      • [Bioperl-l] UCSC database backend   Joel Martin
      • [Bioperl-l] UCSC database backend   Sean Davis
      • [Bioperl-l] UCSC database backend   Sean Davis
      • [Bioperl-l] UCSC database backend   Chris Fields
      • [Bioperl-l] UCSC database backend   Sean Davis
      • [Bioperl-l] UCSC database backend   Chris Fields
      • [Bioperl-l] UCSC database backend   Sean Davis
  • [Bioperl-l] UCSC database backend   Sendu Bala
• [Bioperl-l] UCSC database backend   Cook, Malcolm
• [Bioperl-l] XML parser preference?   Chris Fields
  • [Bioperl-l] XML parser preference?   Mauricio Herrera Cuadra
    • [Bioperl-l] XML parser preference?   Chris Fields
  • [Bioperl-l] XML parser preference?   Robert Buels
    • [Bioperl-l] XML parser preference?   Chris Fields
      • [Bioperl-l] XML parser preference?   Mauricio Herrera Cuadra
      • [Bioperl-l] XML parser preference?   Chris Fields
      • [Bioperl-l] XML parser preference?   Jurgen Pletinckx
      • [Bioperl-l] XML parser preference?   Chris Fields
      • [Bioperl-l] XML parser preference?   Mauricio Herrera Cuadra
  • [Bioperl-l] XML parser preference?   Brian Osborne
    • [Bioperl-l] XML parser preference?   Chris Fields
• [Bioperl-l] RSS feed weirdness from the wiki   Travaglini, Joseph
• [Bioperl-l] SearchIO speed up   Sendu Bala
  • [Bioperl-l] SearchIO speed up   Sean Davis
    • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Sean Davis
      • [Bioperl-l] SearchIO speed up   Chris Fields
  • [Bioperl-l] SearchIO speed up   Chris Fields
    • [Bioperl-l] SearchIO speed up   Sendu Bala
    • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Hilmar Lapp
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Hilmar Lapp
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Hilmar Lapp
      • [Bioperl-l] SearchIO speed up   aaron.j.mackey at gsk.com
      • [Bioperl-l] SearchIO speed up   Chris Fields
  • [Bioperl-l] SearchIO speed up   aaron.j.mackey at gsk.com
    • [Bioperl-l] SearchIO speed up   Chris Fields
    • [Bioperl-l] SearchIO speed up   Ewan Birney
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Ewan Birney
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Torsten Seemann
    • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   aaron.j.mackey at gsk.com
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   aaron.j.mackey at gsk.com
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   aaron.j.mackey at gsk.com
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   aaron.j.mackey at gsk.com
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Hilmar Lapp
      • [Bioperl-l] SearchIO speed up   aaron.j.mackey at gsk.com
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Sean Davis
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Torsten Seemann
      • [Bioperl-l] SearchIO speed up   Chris Fields
  • [Bioperl-l] SearchIO speed up   Sendu Bala
    • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Hilmar Lapp
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Hilmar Lapp
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Hilmar Lapp
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Hilmar Lapp
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Sendu Bala
      • [Bioperl-l] SearchIO speed up   Chris Fields
      • [Bioperl-l] SearchIO speed up   Hilmar Lapp
      • [Bioperl-l] SearchIO speed up   Sean Davis
      • [Bioperl-l] SearchIO speed up   Chris Fields
• [Bioperl-l] RSS feed weirdness from the wiki   Travaglini, Joseph
• [Bioperl-l] PAML + Codeml problem..   Xianjun Dong
  • [Bioperl-l] PAML + Codeml problem..   Ryan Golhar
    • [Bioperl-l] PAML + Codeml problem..   Torsten Seemann
      • [Bioperl-l] PAML + Codeml problem..   Chris Fields
    • [Bioperl-l] PAML + Codeml problem..   Brian Osborne
    • [Bioperl-l] PAML + Codeml problem..   Xianjun Dong
      • [Bioperl-l] PAML + Codeml problem..   Brian Osborne
      • [Bioperl-l] PAML + Codeml problem..   aaron.j.mackey at gsk.com
      • [Bioperl-l] PAML + Codeml problem..   Chris Fields
      • [Bioperl-l] PAML + Codeml problem..   Brian Osborne
      • [Bioperl-l] PAML + Codeml problem..   Chris Fields
      • [Bioperl-l] PAML + Codeml problem..   Brian Osborne
      • [Bioperl-l] PAML + Codeml problem..   Albert Vilella
      • [Bioperl-l] PAML + Codeml problem..   Ryan Golhar
• [Bioperl-l] mumsa in bioperl-run   Albert Vilella
• [Bioperl-l] SearchIO speed up   Amir Karger
  • [Bioperl-l] SearchIO speed up   Chris Fields
  • [Bioperl-l] SearchIO speed up   Brian Osborne
• [Bioperl-l] load_seqdatabase fails when loading refseq plant files   Mike Muratet
  • [Bioperl-l] [BioSQL-l] load_seqdatabase fails when loading refseq plant files   Angel Pizarro
    • [Bioperl-l] [BioSQL-l] load_seqdatabase fails when loading refseq plant files   Mike Muratet
• [Bioperl-l] Extracting gene seq from Bio::DB::GFF   Marco Blanchette
  • [Bioperl-l] Extracting gene seq from Bio::DB::GFF   Scott Cain
    • [Bioperl-l] Extracting gene seq from Bio::DB::GFF   Marco Blanchette
      • [Bioperl-l] Extracting gene seq from Bio::DB::GFF   Chris Fields
      • [Bioperl-l] Extracting gene seq from Bio::DB::GFF   Marco Blanchette
      • [Bioperl-l] Extracting gene seq from Bio::DB::GFF   Chris Fields
      • [Bioperl-l] Extracting gene seq from Bio::DB::GFF   Lincoln Stein
      • [Bioperl-l] Fwd: Extracting gene seq from Bio::DB::GFF   Lincoln Stein
      • [Bioperl-l] Fwd: Extracting gene seq from Bio::DB::GFF   Marco Blanchette
      • [Bioperl-l] Fwd: Extracting gene seq from Bio::DB::GFF   Marco Blanchette
      • [Bioperl-l] Fwd: Extracting gene seq from Bio::DB::GFF   Lincoln Stein
      • [Bioperl-l] Fwd: Extracting gene seq from Bio::DB::GFF   Marco Blanchette
      • [Bioperl-l] Fwd: Extracting gene seq from Bio::DB::GFF   Marco Blanchette
      • [Bioperl-l] Fwd: Extracting gene seq from Bio::DB::GFF   Marco Blanchette
  • [Bioperl-l] Extracting gene seq from Bio::DB::GFF   Chris Fields
• [Bioperl-l] Planned New BioPerl release and Bio::DB::SeqFeature   Chris Fields
  • [Bioperl-l] [Gmod-gbrowse] Planned New BioPerl release and Bio::DB::SeqFeature   Lincoln Stein
    • [Bioperl-l] [Gmod-gbrowse] Planned New BioPerl release andBio::DB::SeqFeature   Chris Fields
• [Bioperl-l] PAML + Codeml problem   Neil Saunders
  • [Bioperl-l] PAML + Codeml problem   Chris Fields
    • [Bioperl-l] PAML + Codeml problem   Neil Saunders
      • [Bioperl-l] PAML + Codeml problem   Chris Fields
      • [Bioperl-l] PAML + Codeml problem   aaron.j.mackey at gsk.com
• [Bioperl-l] Error parsing BLAST report   Freimuth, Robert
  • [Bioperl-l] Error parsing BLAST report   Brian Osborne
• [Bioperl-l] Genes from MySQL database using Bio::DB::GFF   Marco Blanchette
  • [Bioperl-l] Genes from MySQL database using Bio::DB::GFF   Chris Fields
  • [Bioperl-l] Genes from MySQL database using Bio::DB::GFF   Scott Cain
    • [Bioperl-l] Genes from MySQL database using Bio::DB::GFF   Scott Cain
      • [Bioperl-l] Genes from MySQL database using Bio::DB::GFF   Marco Blanchette
      • [Bioperl-l] Genes from MySQL database using Bio::DB::GFF   Scott Cain
      • [Bioperl-l] Genes from MySQL database using Bio::DB::GFF   Marco Blanchette
      • [Bioperl-l] Genes from MySQL database using Bio::DB::GFF   Scott Cain
      • [Bioperl-l] Genes from MySQL database using Bio::DB::GFF   Chris Fields
• [Bioperl-l] Error parsing BLAST report   Freimuth, Robert
  • [Bioperl-l] Error parsing BLAST report   Chris Fields
• [Bioperl-l] starter..help run the first script   Reena Yadav
  • [Bioperl-l] starter..help run the first script   Sendu Bala
  • [Bioperl-l] starter..help run the first script   Chris Fields
• [Bioperl-l] informative codons method for kaks -- Bio/Align/DNAStatistics.pm   Albert Vilella
  • [Bioperl-l] informative codons method for kaks -- Bio/Align/DNAStatistics.pm   Chris Fields
    • [Bioperl-l] informative codons method for kaks -- Bio/Align/DNAStatistics.pm   Albert Vilella
      • [Bioperl-l] informative codons method for kaks --Bio/Align/DNAStatistics.pm   Chris Fields
      • [Bioperl-l] informative codons method for kaks --Bio/Align/DNAStatistics.pm   Albert Vilella
      • [Bioperl-l] informative codons method for kaks --Bio/Align/DNAStatistics.pm   Chris Fields
      • [Bioperl-l] informative codons method for kaks --Bio/Align/DNAStatistics.pm   Hilmar Lapp
      • [Bioperl-l] informative codons method for kaks --Bio/Align/DNAStatistics.pm   Albert Vilella
• [Bioperl-l] Error while parsing a BLAST Report   deepak shingan
• [Bioperl-l] No space between parameters in codeml output.   Seiji Kumagai
  • [Bioperl-l] No space between parameters in codeml output.   Chris Fields
• [Bioperl-l] Error parsing BLAST report   Freimuth, Robert
  • [Bioperl-l] Error parsing BLAST report   Chris Fields
• [Bioperl-l] How to get rid of warnings   Jérémy JUST
  • [Bioperl-l] How to get rid of warnings   Sendu Bala
    • [Bioperl-l] How to get rid of warnings   Niels Larsen
      • [Bioperl-l] How to get rid of warnings   Sendu Bala
      • [Bioperl-l] How to get rid of warnings   Hilmar Lapp
      • [Bioperl-l] How to get rid of warnings   Sendu Bala
      • [Bioperl-l] How to get rid of warnings   Hilmar Lapp
      • [Bioperl-l] How to get rid of warnings   Sendu Bala
      • [Bioperl-l] How to get rid of warnings   Hilmar Lapp
      • [Bioperl-l] How to get rid of warnings   Sendu Bala
      • [Bioperl-l] How to get rid of warnings   Hilmar Lapp
      • [Bioperl-l] How to get rid of warnings   Chris Fields
      • [Bioperl-l] How to get rid of warnings   Chris Fields
      • [Bioperl-l] How to get rid of warnings   Sendu Bala
      • [Bioperl-l] How to get rid of warnings   Chris Fields
    • [Bioperl-l] How to get rid of warnings   Jérémy JUST
  • [Bioperl-l] How to get rid of warnings   Chris Fields
• [Bioperl-l] Motifs and aligned sequences   Antonio
  • [Bioperl-l] Motifs and aligned sequences   Brian Osborne
• [Bioperl-l] DBA_GenericHSP_output???   francois fauteux
  • [Bioperl-l] DBA_GenericHSP_output???   Brian Osborne
• [Bioperl-l] Fuzzy Locations and GenBank   Chris Fields
  • [Bioperl-l] Fuzzy Locations and GenBank   Hilmar Lapp
    • [Bioperl-l] Fuzzy Locations and GenBank   Steve Chervitz
      • [Bioperl-l] Fuzzy Locations and GenBank   Chris Fields
      • [Bioperl-l] Fuzzy Locations and GenBank   Lincoln Stein
      • [Bioperl-l] Fuzzy Locations and GenBank   Chris Fields
      • [Bioperl-l] Fuzzy Locations and GenBank   Hilmar Lapp
      • [Bioperl-l] Fuzzy Locations and GenBank   Lincoln Stein
      • [Bioperl-l] Fuzzy Locations and GenBank   Hilmar Lapp
      • [Bioperl-l] Fuzzy Locations and GenBank   Chris Fields
      • [Bioperl-l] Fuzzy Locations and GenBank   Heikki Lehvaslaiho
• [Bioperl-l] Motifs and aligned sequences   Antoni Fernàndez-Guerra
  • [Bioperl-l] Motifs and aligned sequences   Seiji Kumagai
    • [Bioperl-l] Motifs and aligned sequences   Antoni Fernàndez-Guerra
• [Bioperl-l] Adding all elements from an array of scores   francois fauteux
  • [Bioperl-l] Adding all elements from an array of scores   Marco Blanchette
  • [Bioperl-l] Adding all elements from an array of scores   Sendu Bala
  • [Bioperl-l] Adding all elements from an array of scores   Torsten Seemann
• [Bioperl-l] DBA & HSP -> write_aln (array)   francois fauteux
• [Bioperl-l] New hmmpfam parser   Sendu Bala
  • [Bioperl-l] New hmmpfam parser   Chris Fields
    • [Bioperl-l] New hmmpfam parser   Sendu Bala
• [Bioperl-l] glitch with bootstrap_replicates in Bio::Align::Utils?   Albert Vilella
• [Bioperl-l] argument in Math::MatrixReal   chen li
• [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Sendu Bala
  • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Stefan Kirov
    • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Sendu Bala
      • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Chris Fields
      • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Hilmar Lapp
  • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Chris Fields
    • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Sendu Bala
      • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Chris Fields
• [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   skirov
  • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Sendu Bala
    • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Chris Fields
      • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Sendu Bala
      • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Chris Fields
      • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Hilmar Lapp
      • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Chris Fields
• [Bioperl-l] ensembl API , mysql error   ong at embl.de
• [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   skirov
  • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Sendu Bala
• [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   skirov
• [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   skirov
  • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Chris Fields
• [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   skirov
  • [Bioperl-l] TFBS databases, Bio::Matrix::PSM suitable?   Chris Fields
• [Bioperl-l] Macintosh OS-X, compiling Fortran   Dr. Christoph Gille
• [Bioperl-l] bioperl gurus for bioperl workshops   Albert Vilella
  • [Bioperl-l] bioperl gurus for bioperl workshops   Hilmar Lapp
• [Bioperl-l] Bio::Graphics::Glyph::dna and bgcolor   Adam Sjøgren
  • [Bioperl-l] Bio::Graphics::Glyph::dna and bgcolor   Lincoln Stein
    • [Bioperl-l] Bio::Graphics::Glyph::dna and bgcolor   Adam Sjøgren
• [Bioperl-l] GenBank/EMBL species parsing problems   Chris Fields
• [Bioperl-l] Bio::OntologyIO   Heikki Lehvaslaiho
  • [Bioperl-l] Bio::OntologyIO   Hilmar Lapp
    • [Bioperl-l] Bio::OntologyIO   Heikki Lehvaslaiho
  • [Bioperl-l] Bio::OntologyIO   Sohel Merchant
• [Bioperl-l] GAME XML format - who's maintaining it?   Chris Fields
  • [Bioperl-l] GAME XML format - who's maintaining it?   Sheldon McKay
    • [Bioperl-l] GAME XML format - who's maintaining it?   Chris Fields
      • [Bioperl-l] GAME XML format - who's maintaining it?   Scott Cain
      • [Bioperl-l] GAME XML format - who's maintaining it?   Chris Fields
• [Bioperl-l] regexp / protein database   Hubert Prielinger
  • [Bioperl-l] regexp / protein database   Chris Fields
• [Bioperl-l] regexp / protein database   Cook, Malcolm
  • [Bioperl-l] regexp / protein database   Chris Fields
    • [Bioperl-l] regexp / protein database   Mauricio Herrera Cuadra
      • [Bioperl-l] regexp / protein database   Mauricio Herrera Cuadra
• [Bioperl-l] Feature Request: add -alphabet to AlignIO arguments   Dexter Riley
  • [Bioperl-l] Feature Request: add -alphabet to AlignIO arguments   Chris Fields
• [Bioperl-l] problem with $seq_obj->translate()   Xianjun Dong
  • [Bioperl-l] problem with $seq_obj->translate()   Sendu Bala
• [Bioperl-l] Accesssing local database   kamesh narasimhan
• [Bioperl-l] Accesssing local database   kamesh narasimhan
  • [Bioperl-l] Accesssing local database   Brian Osborne
• [Bioperl-l] How to extract xref information from seq object that is fetched from GenBank?   Sang Chul Choi
  • [Bioperl-l] How to extract xref information from seq object that isfetched from GenBank?   Chris Fields
• [Bioperl-l] How to extract xref information from seq object that is fetched from GenBank?   Sang Chul Choi
  • [Bioperl-l] Fwd: How to extract xref information from seq object that is fetched from GenBank?   Sang Chul Choi
    • [Bioperl-l] How to extract xref information from seq object that is fetched from GenBank?   Sang Chul Choi
• [Bioperl-l] Accesssing local database   Fairley, Derek
• [Bioperl-l] [Fwd: SiteMatrix changes]   Stefan Kirov
  • [Bioperl-l] SiteMatrix changes   Sendu Bala
• [Bioperl-l] Memory requirements for conversion from embl to genbank   Martin MOKREJŠ
  • [Bioperl-l] Memory requirements for conversion from embl to genbank   Chris Fields
    • [Bioperl-l] Memory requirements for conversion from embl to genbank   Martin MOKREJŠ
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   CHANDAN SINGH
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Chris Fields
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Martin MOKREJŠ
      • [Bioperl-l] Memory requirements for conversion from embl togenbank   Chris Fields
  • [Bioperl-l] Memory requirements for conversion from embl to genbank   Sendu Bala
    • [Bioperl-l] Memory requirements for conversion from embl to genbank   Martin MOKREJŠ
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Sendu Bala
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Chris Fields
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Sendu Bala
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Chris Fields
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Martin MOKREJŠ
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Martin MOKREJŠ
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Chris Fields
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Chris Fields
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Martin MOKREJŠ
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Chris Fields
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Martin MOKREJŠ
      • [Bioperl-l] Memory requirements for conversion from embl to genbank   Chris Fields
• [Bioperl-l] SiteMatrix changes   Stefan Kirov
• [Bioperl-l] SiteMatrix changes   skirov
  • [Bioperl-l] SiteMatrix changes   Sendu Bala
    • [Bioperl-l] SiteMatrix changes   Hilmar Lapp
• [Bioperl-l] Write a fasta file with custom title line.   Staffa, Nick (NIH/NIEHS) [C]
  • [Bioperl-l] Write a fasta file with custom title line.   Chris Fields
  • [Bioperl-l] Write a fasta file with custom title line.   Siddhartha Basu
• [Bioperl-l] SiteMatrix changes   skirov
  • [Bioperl-l] SiteMatrix changes   Hilmar Lapp
  • [Bioperl-l] SiteMatrix changes   aaron.j.mackey at gsk.com
    • [Bioperl-l] SiteMatrix changes   Sendu Bala
  • [Bioperl-l] SiteMatrix changes   Sendu Bala
• [Bioperl-l] SiteMatrix changes   skirov
• [Bioperl-l] SiteMatrix changes   skirov
  • [Bioperl-l] SiteMatrix changes   Sendu Bala
  • [Bioperl-l] SiteMatrix changes   Hilmar Lapp
• [Bioperl-l] SiteMatrix changes   skirov
• [Bioperl-l] UCSC database backend   Caleb Davis
• [Bioperl-l] trouble with pairwise_kaks.PLS on Cygwin/XP platform   Caleb F. Davis
  • [Bioperl-l] trouble with pairwise_kaks.PLS on Cygwin/XP platform   Brian Osborne

Last message date: Fri Sep 1 01:11:31 UTC 2006
Archived on: Mon Jun 16 02:47:34 UTC 2014

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