[Bioperl-l] install DBD::mysql, can't execute mysql_config
Torsten Seemann
torsten.seemann at infotech.monash.edu.au
Fri Aug 4 04:04:48 UTC 2006
zhihua li,
> recently i've been trying to install the perl package of DBD::mysql,
> 'cause I need this to use ensembl bioperl API. according to the
> installation file of DBD::mysql, I have to install mysql first. so i
> download the binary mysql file and unpack it into /home/mysql.
>
> when i tried to do make file for DBD::mysql, it alwayse said: can't find
> file mysql_config. actually i found the file mysql_config under the
> directory /home/mysql/bin, so i added the full path to the PATH
> enviroment. yet the setup file of DBD::mysql still kept reporting that
> it can't find mysql_config.
>
> does anyone have a clue about this?
this list is for solving problems with BioPerl, not MySQL or the MySQL DBD
driver. i assume you have read this document:
http://search.cpan.org/src/CAPTTOFU/DBD-mysql-3.0006_1/INSTALL.html
it gives good advice; most linux distributions have already packaged MySQL and
DBD-MySQL for you, eg. in Fedora/Redhat, a "yum install perl-DBD-mysql" would
probably do everything for you.
--Torsten
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