2001-August Archives by Author

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Starting: Wed Aug 1 04:27:41 2001
Ending: Fri Aug 31 16:31:22 2001
Messages: 168

• [Bioperl-l] Restriction Enzymes   simon andrews (BI)
• [Bioperl-l] DNA assembly module   debashis rana (JIC)
• [Bioperl-l] JOIN   =?iso-8859-1?Q?Murat_=DCnalan?=
• [Bioperl-l] IMPORTANT!!!   Yugo Acimovic
• [Bioperl-l] Annotation structure   Ewan Birney
• [Bioperl-l] Bioperl hackathon?   Ewan Birney
• [Bioperl-l] Re: Seq or SeqIO to BSML   Ewan Birney
• [Bioperl-l] Re: Seq or SeqIO to BSML   Ewan Birney
• [Bioperl-l] Phred.pm, Consed.pm, Trim.pm, Primer3.pm   Ewan Birney
• [Bioperl-l] Re: [Biojava-l] about AGAVE   Ewan Birney
• [Bioperl-l] Bioperl hackathon?   Ewan Birney
• [Bioperl-l] question of parsing   Ewan Birney
• [Bioperl-l] .qual are like fasta files   Ewan Birney
• [Bioperl-l] trunc and Features?   Ewan Birney
• [Bioperl-l] Questions about BioPerl   Ewan Birney
• [Bioperl-l] Questions about BioPerl   Ewan Birney
• [Bioperl-l] Questions about BioPerl   Ewan Birney
• [Bioperl-l] Genbank file parsing with $gb = new Bio::SeqIO->new(...)   Ewan Birney
• [Bioperl-l] Each_DBLink : only returning 1 entry ?   Ewan Birney
• [Bioperl-l] Each_DBLink : only returning 1 entry ?   Ewan Birney
• [Bioperl-l] Each_DBLink : only returning 1 entry ?   Ewan Birney
• [Bioperl-l] Each_DBLink : only returning 1 entry ?   Ewan Birney
• [Bioperl-l] Each_DBLink : only returning 1 entry ?   Ewan Birney
• [Bioperl-l] Re: coding custom Gene object   David Block
• [Bioperl-l] Re: coding custom Gene object   David Block
• [Bioperl-l] Re: coding custom Gene object   David Block
• [Bioperl-l] Cloning seqfeatures   David Block
• [Bioperl-l] Blessing it is...   David Block
• [Bioperl-l] Cloning seqfeatures   David Block
• [Bioperl-l] Bioperl hackathon?   Jeffrey Chang
• [Bioperl-l] Bioperl hackathon?   Jeffrey Chang
• [Bioperl-l] Bio::Tools::Blast update   Chervitz, Steve
• [Bioperl-l] Extracting patterns   Ken Y. Clark
• [Bioperl-l] .qual are like fasta files   Malcolm Cook
• [Bioperl-l] Re: coding custom Gene object   Gene Cutler
• [Bioperl-l] Bioperl hackathon?   Andrew Dalke
• [Bioperl-l] Re: Annotation structure   Thomas Down
• [Bioperl-l] Multiple sequence alignment consensus generation   David J. Evans
• [Bioperl-l] Processing large fasta sequences throught SeqIO   Josep Francesc Abril Ferrando
• [Bioperl-l] Processing large fasta sequences throught SeqIO   Josep Francesc Abril Ferrando
• [Bioperl-l] Problems compiling bioperlHi   Pedro A Reche Gallardo
• [Bioperl-l] PLEASE HELP   Pedro A Reche Gallardo
• [Bioperl-l] FASTA format   Pedro A Reche Gallardo
• [Bioperl-l] parsing blast output and obtaining seq info   Gopinath Ganji
• [Bioperl-l] pSM vs .Framesearch   Paul Gordon
• [Bioperl-l] array of SeqIO objects   Liu Haifeng
• [Bioperl-l] Restriction Enzymes   Roger Hall
• [Bioperl-l] Problem w/ extracting start and stop of a blast alignment   Roger Hall
• [Bioperl-l] Re: DBD Oracle module installation   David Iberri
• [Bioperl-l] question of parsing   Cheng-Yuan Kao
• [Bioperl-l] Phred.pm, Consed.pm, Trim.pm, Primer3.pm   Hilmar Lapp
• [Bioperl-l] .qual are like fasta files   Hilmar Lapp
• [Bioperl-l] conservative amino acid change?   Hilmar Lapp
• [Bioperl-l] conservative amino acid change?   Hilmar Lapp
• [Bioperl-l] conservative amino acid change?   Hilmar Lapp
• [Bioperl-l] .qual are like fasta files   Hilmar Lapp
• [Bioperl-l] Bio::Seq::SeqWithQuality and Bio::SeqIO::phd   Hilmar Lapp
• [Bioperl-l] Bio::Tools::Blast update   Hilmar Lapp
• [Bioperl-l] Annotation structure   Hilmar Lapp
• [Bioperl-l] Bio::Tools::Blast update   Hilmar Lapp
• [Bioperl-l] frame/strand in [t]blast{n,p,x}   Hilmar Lapp
• [Bioperl-l] Problem w/ extracting start and stop of a blast alignment   Hilmar Lapp
• [Bioperl-l] Restriction Enzymes   Hilmar Lapp
• [Bioperl-l] Re:StandAloneBlast troubles   Hilmar Lapp
• [Bioperl-l] discusion/advice on non-bioperl bioinformatics modules   Hilmar Lapp
• [Bioperl-l] Standaloneblast   Hilmar Lapp
• [Bioperl-l] BPlite and frames   Hilmar Lapp
• [Bioperl-l] BPlite and frames   Hilmar Lapp
• [Bioperl-l] StandaloneBlast   Hilmar Lapp
• [Bioperl-l] Transcript.pm   Hilmar Lapp
• [Bioperl-l] Cloning seqfeatures vs reblessing   Hilmar Lapp
• [Bioperl-l] writing scf files   Hilmar Lapp
• [Bioperl-l] Questions about BioPerl   Hilmar Lapp
• [Bioperl-l] Questions about BioPerl   Hilmar Lapp
• [Bioperl-l] conservative amino acid change?   Heikki Lehvaslaiho
• [Bioperl-l] Bio::LocatableSeq::location_from_column   Heikki Lehvaslaiho
• [Bioperl-l] conservative amino acid change?   Heikki Lehvaslaiho
• [Bioperl-l] DNA assembly module   Heikki Lehvaslaiho
• [Bioperl-l] conservative amino acid change?   Heikki Lehvaslaiho
• [Bioperl-l] conservative amino acid change?   Heikki Lehvaslaiho
• [Bioperl-l] .qual are like fasta files   Heikki Lehvaslaiho
• [Bioperl-l] conservative amino acid change?   Heikki Lehvaslaiho
• [Bioperl-l] Directions for qual modules.   Heikki Lehvaslaiho
• [Bioperl-l] extracting oriented subsequences   Heikki Lehvaslaiho
• [Bioperl-l] getting credit for bioperl code/doc fixes   Heikki Lehvaslaiho
• [Bioperl-l] sub   Li, Alex
• [Bioperl-l] Restriction Enzymes   Marc Logghe
• [Bioperl-l] conservative amino acid change?   Aaron J Mackey
• [Bioperl-l] conservative amino acid change?   Aaron J Mackey
• [Bioperl-l] conservative amino acid change?   Aaron J Mackey
• [Bioperl-l] conservative amino acid change?   Aaron J Mackey
• [Bioperl-l] conservative amino acid change?   Aaron J Mackey
• [Bioperl-l] writing scf files   Joel Martin
• [Bioperl-l] Phred.pm, Consed.pm, Trim.pm, Primer3.pm   Chad Matsalla
• [Bioperl-l] Phred.pm, Consed.pm, Trim.pm, Primer3.pm   Chad Matsalla
• [Bioperl-l] .qual are like fasta files   Chad Matsalla
• [Bioperl-l] .qual are like fasta files   Chad Matsalla
• [Bioperl-l] Directions for qual modules.   Chad Matsalla
• [Bioperl-l] # $id, copyright, and basic cvs questions   Chad Matsalla
• [Bioperl-l] Bio::Seq::SeqWithQuality and Bio::SeqIO::phd   Chad Matsalla
• [Bioperl-l] Phred.pm, Consed.pm, Trim.pm, Primer3.pm   Chad Matsalla
• [Bioperl-l] writing scf files   Chad Matsalla
• [Bioperl-l] Bioperl hackathon?   Nirav Merchant
• [Bioperl-l] Extracting patterns   Mariana Mondragon
• [Bioperl-l] Cloning seqfeatures   Chris Mungall
• [Bioperl-l] bp light strand method?   Neil, Keith
• [Bioperl-l] StandAloneBlast troubles   Ngo, Viet
• [Bioperl-l] about AGAVE   Hanning Ni
• [Bioperl-l] Bioperl hackathon?   Jon Orwant
• [Bioperl-l] Bioperl hackathon?   Jon Orwant
• [Bioperl-l] New bioinformatics list   Jon Orwant
• [Bioperl-l] StandAloneBlast troubles   Osborne, Brian
• [Bioperl-l] Genbank file parsing with $gb = new Bio::SeqIO->new(...)   Denis Pugnere
• [Bioperl-l] discusion/advice on non-bioperl bioinformatics modules   Sean Quinlan
• [Bioperl-l] discusion/advice on non-bioperl bioinformatics modules   Sean P. Quinlan
• [Bioperl-l] (no subject)   Jason Raymond
• [Bioperl-l] bioperl newcomer's questions   Jason Raymond
• [Bioperl-l] Problem w/ extracting start and stop of a blast alignment   Erik Richly
• [Bioperl-l] 0.9.0   Todd Richmond
• [Bioperl-l] Each_DBLink : only returning 1 entry ?   Jean-Jack M. Riethoven
• [Bioperl-l] Each_DBLink : only returning 1 entry ?   Jean-Jack M. Riethoven
• [Bioperl-l] Each_DBLink : only returning 1 entry ?   Jean-Jack M. Riethoven
• [Bioperl-l] Newbie questions:compiling bioperl ext package install on windows OS   Philippe Rocca-Serra
• [Bioperl-l] XS based modules from bioperl-ext   Philippe Rocca-Serra
• [Bioperl-l] About installation   Yanyang Shi
• [Bioperl-l] Xobjects and Chart::Gnuplot   Nathan O. Siemers
• [Bioperl-l] Seq or SeqIO to BSML   Nathan O. Siemers
• [Bioperl-l] Re: Seq or SeqIO to BSML   Nathan O. Siemers
• [Bioperl-l] PLEASE HELP   Nathan O. Siemers
• [Bioperl-l] Public Release of the Xobjects gene expression package   Nathan O. Siemers
• [Bioperl-l] bp light strand method?   Jason Stajich
• [Bioperl-l] parsing blast output and obtaining seq info   Jason Stajich
• [Bioperl-l] Bioperl hackathon?   Jason Stajich
• [Bioperl-l] array of SeqIO objects   Jason Stajich
• [Bioperl-l] Call for submission of scripts   Jason Stajich
• [Bioperl-l] Problems compiling bioperlHi   Jason Stajich
• [Bioperl-l] gui stuff   Jason Stajich
• [Bioperl-l] Directions for qual modules.   Jason Stajich
• [Bioperl-l] # $id, copyright, and basic cvs questions   Jason Stajich
• [Bioperl-l] 0.9.0   Jason Stajich
• [Bioperl-l] 0.9.0 released   Jason Stajich
• [Bioperl-l] bioperl newcomer's questions   Jason Stajich
• [Bioperl-l] StandAloneBlast troubles   Jason Stajich
• [Bioperl-l] StandAloneBlast troubles   Jason Stajich
• [Bioperl-l] Questions about BioPerl   Jason Stajich
• [Bioperl-l] Processing large fasta sequences throught SeqIO   Jason Stajich
• [Bioperl-l] Re: [Bioperl-guts-l] Notification: incoming/1001   Jason Stajich
• [Bioperl-l] Processing large fasta sequences throught SeqIO   Jason Stajich
• [Bioperl-l] conservative amino acid change?   Arlin Stoltzfus
• [Bioperl-l] Restriction Enzymes   Charles Tilford
• [Bioperl-l] trunc and Features?   Charles Tilford
• [Bioperl-l] conservative amino acid change?   Nathan Torkington
• [Bioperl-l] Bioperl hackathon?   Nathan Torkington
• [Bioperl-l] Bioperl hackathon?   Nathan Torkington
• [Bioperl-l] Questions about BioPerl   Nathan Torkington
• [Bioperl-l] Questions about BioPerl   Nathan Torkington
• [Bioperl-l] A sucker!^W volunteer!   Nathan Torkington
• [Bioperl-l] extracting oriented subsequences   V.Kuryshev@Dkfz-Heidelberg.de
• [Bioperl-l] 0.9.0 released   Johann Visagie
• [Bioperl-l] pSM vs .Framesearch   Wiepert, Mathieu
• [Bioperl-l] pSM vs .Framesearch   Wiepert, Mathieu
• [Bioperl-l] DBD Oracle module installation   Zhan-Yang Zhu
• [Bioperl-l] Your Web Site is Not Responding   cs-adam.brett@mail.internetseer.com
• [Bioperl-l] Bioperl hackathon?   chris dagdigian
• [Bioperl-l] About installation   chris dagdigian
• [Bioperl-l] Re:StandAloneBlast troubles   nick holton
• [Bioperl-l] Standaloneblast   nick holton
• [Bioperl-l] StandaloneBlast   nick holton

Last message date: Fri Aug 31 16:31:22 2001
Archived on: Fri Aug 31 11:32:03 2001

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