[Bioperl-l] conservative amino acid change?
Mon, 06 Aug 2001 11:59:59 +0100
Hilmar Lapp wrote:
> Heikki Lehvaslaiho wrote:
> > My implementation has the BLOSUM62 matrix inside the package. I can
> > not remember matrixes never being discussed in bioperl context. Other
> > bio* projects might have a selection of standard similarity matrixes
> > included. (?) Should we have them? And classes dealing with them?
> I think we should. It is definitely going to be useful for other
> modules, too.
OK. I'll write the modules:
or something like that...
We'll need a data directory to place the default matrixes in. What
would be the best (platform independent) way of refering to files