[Bioperl-l] Seq or SeqIO to BSML
Nathan O. Siemers
Fri, 03 Aug 2001 09:34:15 -0400
As mentioned, we have volunteered to write a BSML output
module for Seq or SeqIO objects, initially for use with
ensembl but of course to be designed to be generally useful.
Could you provide a data dumper output of a fairly small but
richly annotated area of the genome from ensembl? We can eval
it up locally and use it as our starting point.
Finally, I would welcome discussion as to where this code
should eventually be placed (how tightly integrated?) in the
Nathan Siemers, Group Leader, Bioinformatics-Applied Genomics
Bristol-Myers Squibb Pharmaceutical Research Institute, Hopewell 3-0.07
P.O. Box 5400, Princeton, NJ 08543-5400, (609)818-6568