August 2007 Archives by author

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Starting: Wed Aug 1 02:15:45 UTC 2007
Ending: Fri Aug 31 14:51:51 UTC 2007
Messages: 217

• [Bioperl-l] trying to save blast hit sequences to fasta file   Alicia Amadoz
• [Bioperl-l] trying to save blast hit sequences to fasta file   Alicia Amadoz
• [Bioperl-l] trying to save blast hit sequences to fasta file   Alicia Amadoz
• [Bioperl-l] error using standaloneblast through webserver, part II   Alicia Amadoz
• [Bioperl-l] error using standaloneblast through webserver, part II   Alicia Amadoz
• [Bioperl-l] Is it possible to do contig alignments?   Florent Angly
• [Bioperl-l] Is it possible to do contig alignments?   Florent Angly
• [Bioperl-l] Is it possible to do contig alignments?   Florent Angly
• [Bioperl-l] Feature/Annotation rollback finished   Florent Angly
• [Bioperl-l] newbie wants install help   Sendu Bala
• [Bioperl-l] newbie wants install help   Sendu Bala
• [Bioperl-l] Bio::Graphics : To change scale color & sort and add direction to SeqFeature   Sendu Bala
• [Bioperl-l] Bio::Graphics : To change scale color & sort and add direction to SeqFeature   Sendu Bala
• [Bioperl-l] newbie wants install help   Sendu Bala
• [Bioperl-l] Should coords be adjusted after removing alignment columns?   Sendu Bala
• [Bioperl-l] Should coords be adjusted after removing alignment columns?   Sendu Bala
• [Bioperl-l] Developer docs   Sendu Bala
• [Bioperl-l] Need assistance with make error   Sendu Bala
• [Bioperl-l] PDB Parser   Sendu Bala
• [Bioperl-l] Request for Activeperl software   Sendu Bala
• [Bioperl-l] PDB Parser   Sendu Bala
• [Bioperl-l] concatenating aln splices   Sendu Bala
• [Bioperl-l] PDB Parser   Sendu Bala
• [Bioperl-l] extra rel. 1.6 suggestion   Sendu Bala
• [Bioperl-l] Is it possible to do contig alignments?   Sendu Bala
• [Bioperl-l] please some help   Sendu Bala
• [Bioperl-l] Is it possible to do contig alignments?   Sendu Bala
• [Bioperl-l] Homologene parser?   Siddhartha Basu
• [Bioperl-l] Homologene parser?   Siddhartha Basu
• [Bioperl-l] Need assistance with make error   Kevin Brown
• [Bioperl-l] Clarifying license of bioperl   Kevin Brown
• [Bioperl-l] How to 'force' Bio::Graphics to draw image according to input file ?   Scott Cain
• [Bioperl-l] SeqFeature/AnnotatableI and rel. 1.6   Scott Cain
• [Bioperl-l] Feature/Annotation rollback finished   Scott Cain
• [Bioperl-l] Feature/Annotation rollback finished   Scott Cain
• [Bioperl-l] Feature/Annotation rollback finished   Scott Cain
• [Bioperl-l] Feature/Annotation rollback finished   Scott Cain
• [Bioperl-l] Feature/Annotation rollback finished   Scott Cain
• [Bioperl-l] Feature/Annotation rollback finished   Scott Cain
• [Bioperl-l] Feature/Annotation rollback finished   Scott Cain
• [Bioperl-l] Need assistance with make error   Mauricio Herrera Cuadra
• [Bioperl-l] Developer docs   Mauricio Herrera Cuadra
• [Bioperl-l] Bio::Seq -> Solr (Lucene) ?   Sean Davis
• [Bioperl-l] the most weird thing I've seen, help please   De-Jian,ZHAO
• [Bioperl-l] How to get the full methods of a bioperl object?   De-Jian,ZHAO
• [Bioperl-l] How to get the full methods of a bioperl object?   De-Jian,ZHAO
• [Bioperl-l] Is it possible to do contig alignments?   De-Jian,ZHAO
• [Bioperl-l] Request for Activeperl software   Spiros Denaxas
• [Bioperl-l] Bio::SeqIO::phd_comment objet   Jean-Marc FRIGERIO
• [Bioperl-l] Perl 3D OpenGL   Chris Fields
• [Bioperl-l] URGENT : Problem in OMIM parser   Chris Fields
• [Bioperl-l] Fwd: nonstop repeated output from Remote_blast with xml   Chris Fields
• [Bioperl-l] URGENT : Problem in OMIM parser   Chris Fields
• [Bioperl-l] URGENT : Problem in OMIM parser   Chris Fields
• [Bioperl-l] Fwd: nonstop repeated output from Remote_blast with xml   Chris Fields
• [Bioperl-l] Fwd: Question regarding Bio::GenBank module   Chris Fields
• [Bioperl-l] ATTN: Matthew Laird & Elia----blastall call crashed from StandAloneBlast   Chris Fields
• [Bioperl-l] ATTN: Matthew Laird & Elia----blastall call crashed from StandAloneBlast   Chris Fields
• [Bioperl-l] Bio::Graphics : To change scale color & sort and add direction to SeqFeature   Chris Fields
• [Bioperl-l] Bio::Graphics : To change scale color & sort and add direction to SeqFeature   Chris Fields
• [Bioperl-l] Homologene parser?   Chris Fields
• [Bioperl-l] Should coords be adjusted after removing alignment columns?   Chris Fields
• [Bioperl-l] Should coords be adjusted after removing alignment columns?   Chris Fields
• [Bioperl-l] Need assistance with make error   Chris Fields
• [Bioperl-l] Need assistance with make error   Chris Fields
• [Bioperl-l] exonerate parser in bioperl-live fails when protein2dna comparison is performed   Chris Fields
• [Bioperl-l] How to create contrasting colors in every singe track - Bio::Graphics   Chris Fields
• [Bioperl-l] PDB Parser   Chris Fields
• [Bioperl-l] Announcement: infernal/erpin/rnamotif parsers   Chris Fields
• [Bioperl-l] Problem with Bio::SeqIO::staden::read on Mac OS X   Chris Fields
• [Bioperl-l] Clarifying license of bioperl   Chris Fields
• [Bioperl-l] Bio::SeqIO::swiss species parsing bug?   Chris Fields
• [Bioperl-l] Clarifying license of bioperl   Chris Fields
• [Bioperl-l] PDB Parser   Chris Fields
• [Bioperl-l] EUtilities, was Re: PDB Parser   Chris Fields
• [Bioperl-l] subversion progress   Chris Fields
• [Bioperl-l] RemoteBlast not handling NCBI Error message   Chris Fields
• [Bioperl-l] SearchIO-BLAST   Chris Fields
• [Bioperl-l] wiki: Current Events   Chris Fields
• [Bioperl-l] SeqFeature/AnnotatableI and rel. 1.6   Chris Fields
• [Bioperl-l] extra rel. 1.6 suggestion   Chris Fields
• [Bioperl-l] SeqFeature/AnnotatableI and rel. 1.6   Chris Fields
• [Bioperl-l] SeqFeature/AnnotatableI and rel. 1.6   Chris Fields
• [Bioperl-l] Bio::Expression & Re: ReseqChip, module/package name   Chris Fields
• [Bioperl-l] SeqFeature/AnnotatableI and rel. 1.6   Chris Fields
• [Bioperl-l] Is it possible to do contig alignments?   Chris Fields
• [Bioperl-l] Bio::Expression & Re: ReseqChip, module/package name   Chris Fields
• [Bioperl-l] SeqFeature/AnnotatableI and rel. 1.6   Chris Fields
• [Bioperl-l] undef SeqFeature tag values   Chris Fields
• [Bioperl-l] undef SeqFeature tag values   Chris Fields
• [Bioperl-l] undef SeqFeature tag values   Chris Fields
• [Bioperl-l] Feature/Annotation rollback(update)   Chris Fields
• [Bioperl-l] Feature/Annotation rollback(update)   Chris Fields
• [Bioperl-l] Feature/Annotation rollback(update)   Chris Fields
• [Bioperl-l] Bio::SeqFeature::Annotated status   Chris Fields
• [Bioperl-l] Bio::Ontology::Term (rollback question)   Chris Fields
• [Bioperl-l] Bio::Ontology::Term (rollback question)   Chris Fields
• [Bioperl-l] Feature/Annotation rollback (update #2)   Chris Fields
• [Bioperl-l] Feature/Annotation rollback finished   Chris Fields
• [Bioperl-l] Fwd: Announcing Ngila 1.2.1 Alignment Program   Chris Fields
• [Bioperl-l] remote SwissProt server problems   Chris Fields
• [Bioperl-l] Feature/Annotation rollback finished   Chris Fields
• [Bioperl-l] Bio::Seq -> Solr (Lucene) ?   Chris Fields
• [Bioperl-l] Feature/Annotation rollback finished   Chris Fields
• [Bioperl-l] Feature/Annotation rollback finished   Chris Fields
• [Bioperl-l] Feature/Annotation rollback finished   Chris Fields
• [Bioperl-l] remote SwissProt server problems   Chris Fields
• [Bioperl-l] Feature/Annotation rollback finished   Chris Fields
• [Bioperl-l] Feature/Annotation rollback finished   Chris Fields
• [Bioperl-l] Feature/Annotation rollback finished   Chris Fields
• [Bioperl-l] Bio::Expression & Re: ReseqChip, module/package name   Chris Fields
• [Bioperl-l] need help   Chris Fields
• [Bioperl-l] Bio::SeqIO::swiss species parsing bug?   David Gonzalez
• [Bioperl-l] How to get the full methods of a bioperl object?   Nathan Haigh
• [Bioperl-l] subversion progress   Nathan Haigh
• [Bioperl-l] newbie wants install help   Nathan S. Haigh
• [Bioperl-l] Warnings/errors generated by Eclipse   Nathan S. Haigh
• [Bioperl-l] extra rel. 1.6 suggestion   Nathan S. Haigh
• [Bioperl-l] undef SeqFeature tag values   Nathan S. Haigh
• [Bioperl-l] please some help   Nathan S. Haigh
• [Bioperl-l] trying to save blast hit sequences to fasta file   Jay Hannah
• [Bioperl-l] trying to save blast hit sequences to fasta file   Jay Hannah
• [Bioperl-l] wiki: Current Events   Jay Hannah
• [Bioperl-l] Problems of parse emboss water result by Bio::AlignIO   Jay Hannah
• [Bioperl-l] Bio::Seq -> Solr (Lucene) ?   Jay Hannah
• [Bioperl-l] error using standaloneblast through webserver, part II   Martin Heusel
• [Bioperl-l] PDB Parser   Hans Rudolf Hotz
• [Bioperl-l] Need assistance with make error   Johnson, Mary (NIH/NCI) [C]
• [Bioperl-l] Need assistance with make error   Johnson, Mary (NIH/NCI) [C]
• [Bioperl-l] Need assistance with make error   Johnson, Mary (NIH/NCI) [C]
• [Bioperl-l] Need assistance with make error   Johnson, Mary (NIH/NCI) [C]
• [Bioperl-l] Perl 3D OpenGL   Shameer Khadar
• [Bioperl-l] Bio::Graphics : To change scale color & sort and add direction to SeqFeature   Shameer Khadar
• [Bioperl-l] Bio::Graphics : To change scale color & sort and add direction to SeqFeature   Shameer Khadar
• [Bioperl-l] Bio::Graphics : To change scale color & sort and add direction to SeqFeature   Shameer Khadar
• [Bioperl-l] How to 'force' Bio::Graphics to draw image according to input file ?   Shameer Khadar
• [Bioperl-l] How to 'force' Bio::Graphics to draw image according to input file ?   Shameer Khadar
• [Bioperl-l] How to create contrasting colors in every singe track - Bio::Graphics   Razi Khaja
• [Bioperl-l] Clarifying license of bioperl   Alex Lancaster
• [Bioperl-l] Clarifying license of bioperl   Alex Lancaster
• [Bioperl-l] Clarifying license of bioperl   Alex Lancaster
• [Bioperl-l] Clarifying license of bioperl   Alex Lancaster
• [Bioperl-l] Clarifying license of bioperl   Hilmar Lapp
• [Bioperl-l] subversion progress   Hilmar Lapp
• [Bioperl-l] SeqFeature/AnnotatableI and rel. 1.6   Hilmar Lapp
• [Bioperl-l] Bio::Expression & Re: ReseqChip, module/package name   Hilmar Lapp
• [Bioperl-l] undef SeqFeature tag values   Hilmar Lapp
• [Bioperl-l] Feature/Annotation rollback(update)   Hilmar Lapp
• [Bioperl-l] Feature/Annotation rollback(update)   Hilmar Lapp
• [Bioperl-l] Feature/Annotation rollback(update)   Hilmar Lapp
• [Bioperl-l] Bio::Ontology::Term (rollback question)   Hilmar Lapp
• [Bioperl-l] Fwd: Announcing Ngila 1.2.1 Alignment Program   Hilmar Lapp
• [Bioperl-l] Fwd: Announcing Ngila 1.2.1 Alignment Program   Hilmar Lapp
• [Bioperl-l] Fwd: Announcing Ngila 1.2.1 Alignment Program   Hilmar Lapp
• [Bioperl-l] Bio::Seq -> Solr (Lucene) ?   Hilmar Lapp
• [Bioperl-l] Feature/Annotation rollback finished   Hilmar Lapp
• [Bioperl-l] Feature/Annotation rollback finished   Hilmar Lapp
• [Bioperl-l] Feature/Annotation rollback finished   Hilmar Lapp
• [Bioperl-l] Feature/Annotation rollback finished   Hilmar Lapp
• [Bioperl-l] Feature/Annotation rollback finished   Hilmar Lapp
• [Bioperl-l] trying to save blast hit sequences to fasta file   Xianran Li
• [Bioperl-l] trying to save blast hit sequences to fasta file   Xianran Li
• [Bioperl-l] Homologene parser?   Andrew Macgregor
• [Bioperl-l] Homologene parser?   Andrew Macgregor
• [Bioperl-l] trying to save blast hit sequences to fasta file   Malay
• [Bioperl-l] newbie wants install help   Malay
• [Bioperl-l] Developer docs   Malay
• [Bioperl-l] SeqFeature/AnnotatableI and rel. 1.6   Scott Markel
• [Bioperl-l] PDB Parser   Bernd Mueller
• [Bioperl-l] PDB Parser   Bernd Mueller
• [Bioperl-l] Problem with Bio::SeqIO::staden::read on Mac OS X   Mike Muratet
• [Bioperl-l] exonerate parser in bioperl-live fails when protein2dna comparison is performed   Tania Oh
• [Bioperl-l] trying to save blast hit sequences to fasta file   Torsten Seemann
• [Bioperl-l] trying to save blast hit sequences to fasta file   Torsten Seemann
• [Bioperl-l] ATTN: Matthew Laird & Elia----blastall call crashed from StandAloneBlast   Torsten Seemann
• [Bioperl-l] Fwd: Question regarding Bio::GenBank module   Jason Stajich
• [Bioperl-l] ReseqChip, module/package name   Marian Thieme
• [Bioperl-l] Bio::Expression & Re: ReseqChip, module/package name   Marian Thieme
• [Bioperl-l] concatenating aln splices   Joshua Udall
• [Bioperl-l] concatenating aln splices   Joshua Udall
• [Bioperl-l] How to get the full methods of a bioperl object?   Albert Vilella
• [Bioperl-l] display protein/CDS multiple sequence alignments with exon boundaries   Albert Vilella
• [Bioperl-l] PDB Parser   Oliver Wafzig
• [Bioperl-l] RemoteBlast not handling NCBI Error message   Jason Walker
• [Bioperl-l] SearchIO-BLAST   Bernd Web
• [Bioperl-l] How to create contrasting colors in every singe track - Bio::Graphics   Edward Wijaya
• [Bioperl-l] Request for Activeperl software   Adam Witney
• [Bioperl-l] standalone blastall call crashed, please help   Guojun Yang
• [Bioperl-l] ATTN: Matthew Laird & Elia----blastall call crashed from StandAloneBlast   Guojun Yang
• [Bioperl-l] the most weird thing I've seen, help please   Guojun Yang
• [Bioperl-l] Assembly::IO write_assembly and remove_seq   Janet Young
• [Bioperl-l] Bio::Expression & Re: ReseqChip, module/package name   marian.thieme at arcor.de
• [Bioperl-l] Problem with Bio::SeqIO::staden::read on Mac OS X   muratem at eng.uah.edu
• [Bioperl-l] please some help   mcons004 at fiu.edu
• [Bioperl-l] newbie wants install help   hari jayaram
• [Bioperl-l] newbie wants install help   hari jayaram
• [Bioperl-l] Request for Activeperl software   pratchusha kamireddy
• [Bioperl-l] Bio::Expression & Re: ReseqChip, module/package name   marian
• [Bioperl-l] URGENT : Problem in OMIM parser   neeti somaiya
• [Bioperl-l] URGENT : Problem in OMIM parser   neeti somaiya
• [Bioperl-l] URGENT : Problem in OMIM parser   neeti somaiya
• [Bioperl-l] URGENT : Problem in OMIM parser   neeti somaiya
• [Bioperl-l] Homologene parser?   neeti somaiya
• [Bioperl-l] Homologene parser?   neeti somaiya
• [Bioperl-l] Homologene parser?   neeti somaiya
• [Bioperl-l] PDB Parser   neeti somaiya
• [Bioperl-l] Homologene parser?   neeti somaiya
• [Bioperl-l] PDB Parser   neeti somaiya
• [Bioperl-l] PDB Parser   neeti somaiya
• [Bioperl-l] PDB Parser   neeti somaiya
• [Bioperl-l] PDB Parser   neeti somaiya
• [Bioperl-l] PDB Parser   neeti somaiya
• [Bioperl-l] PDB Parser   neeti somaiya
• [Bioperl-l] PDB Parser   neeti somaiya
• [Bioperl-l] kegg xml parsing   neeti somaiya
• [Bioperl-l] need help   neeti somaiya
• [Bioperl-l] Problems of parse emboss water result by Bio::AlignIO   zeroliu

Last message date: Fri Aug 31 14:51:51 UTC 2007
Archived on: Mon Jun 16 02:48:38 UTC 2014

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