2000-October Archives by Subject
Starting: Wed Dec 31 19:00:00 1969
Ending: Tue Oct 31 08:31:29 2000
Messages: 243
- [Bioperl-l] $seq->id() is read only
Kris Boulez
- [Bioperl-l] $seq->id() is read only
Kris Boulez
- [Bioperl-l] $seq->id() is read only
Ewan Birney
- [Bioperl-l] $seq->id() is read only
hilmar.lapp@pharma.Novartis.com
- [Bioperl-l] $seq->id() is read only
hilmar.lapp@pharma.Novartis.com
- [Bioperl-l] $seq->id() is read only
Kris Boulez
- [Bioperl-l] (no subject)
Raphael Noirfalise
- [Bioperl-l] 0.6.2 and /examples
Clay Shirky
- [Bioperl-l] 0.6.2 and /examples
Ewan Birney
- [Bioperl-l] 0.6.2 and /examples
Ewan Birney
- [Bioperl-l] 3rd and last candidate out?
Ewan Birney
- [Bioperl-l] ambiguous nucleotide translation table
Ian Korf
- [Bioperl-l] Bio::PrimarySeq changes
Jason Eric Stajich
- [Bioperl-l] Bio::PrimarySeq changes
David Block
- [Bioperl-l] Bio::PrimarySeq changes
Kris Boulez
- [Bioperl-l] Bio::PrimarySeq changes
Mark Wilkinson
- [Bioperl-l] Bio::Tools::Blast parsing & report generation
Brian A. Desany, Ph.D.
- [Bioperl-l] Bioperl 0.6.2 Released
Ewan Birney
- [Bioperl-l] bioperl-0.6.2pre3
David Block
- [Bioperl-l] bioperl-0.6.2pre3
Hilmar Lapp
- [Bioperl-l] bioperl-gui now in cvs repository!
David Block
- [Bioperl-l] Can't locate "_tag_value" error message in BPlite.t test
Peter Schattner
- [Bioperl-l] Can't locate "_tag_value" error message in BPlite.t test
Hilmar Lapp
- [Bioperl-l] Can't locate "_tag_value" error message in BPlite.t test
Peter Schattner
- [Bioperl-l] Can't locate "_tag_value" error message in BPlite.t test
Hilmar Lapp
- [Bioperl-l] Changes file
Ewan Birney
- [Bioperl-l] Changes file
Hilmar Lapp
- [Bioperl-l] changes to GenBank (and other) parsing in 0.6.2?
Mark Wilkinson
- [Bioperl-l] changes to GenBank (and other) parsing in 0.6.2?
Hilmar Lapp
- [Bioperl-l] changes to GenBank (and other) parsing in 0.6.2?
Mark Wilkinson
- [Bioperl-l] clarification on Bio::DB::GenBank
Ewan Birney
- [Bioperl-l] clarification on Bio::DB::GenBank
Osborne, Brian
- [Bioperl-l] clarification on Bio::DB::GenBank
Ewan Birney
- [Bioperl-l] clarified : clarification on Bio::DB::GenBank
Osborne, Brian
- [Bioperl-l] Clustalw.pm wrapper model checked in
Peter Schattner
- [Bioperl-l] Clustalw.pm wrapper module checked in
Peter Schattner
- [Bioperl-l] Configuring BioPerl::DB for a fire wall
Kevin Clancy
- [Bioperl-l] Cruft left over in bioperl-0.6.2pre3
Ewan Birney
- [Bioperl-l] Cruft left over in bioperl-0.6.2pre3
Peter van Heusden
- [Bioperl-l] Cruft left over in bioperl-0.6.2pre3
Peter van Heusden
- [Bioperl-l] CVS tags for Ensembl
Ewan Birney
- [Bioperl-l] CVS tags for Ensembl
hilmar.lapp@pharma.Novartis.com
- [Bioperl-l] CVS tags for Ensembl
chris.dag
- [Bioperl-l] CVS tags for Ensembl
Ewan Birney
- [Bioperl-l] CVS tags for Ensembl
Hilmar Lapp
- [Bioperl-l] Detecting type of an object.
Peter van Heusden
- [Bioperl-l] Detecting type of an object.
gert thijs
- [Bioperl-l] Detecting type of an object.
hilmar.lapp@pharma.Novartis.com
- [Bioperl-l] Detecting type of an object.
Peter van Heusden
- [Bioperl-l] Feedback from the course we ran
Kris Boulez
- [Bioperl-l] Final 0.6.2 checks/merges
Ewan Birney
- [Bioperl-l] FreeBSD port of Bioperl
Johann Visagie
- [Bioperl-l] getting the Sbjct database from a hit
Catherine Letondal
- [Bioperl-l] getting the Sbjct database from a hit
Hilmar Lapp
- [Bioperl-l] getting the Sbjct database from a hit
Catherine Letondal
- [Bioperl-l] getting the Sbjct database from a hit
Hilmar Lapp
- [Bioperl-l] getting the Sbjct database from a hit
Stephen A. Chervitz
- [Bioperl-l] getting the Sbjct database from a hit
Catherine Letondal
- [Bioperl-l] getting the Sbjct database from a hit
Catherine Letondal
- [Bioperl-l] getting the Sbjct database from a hit
hlapp@gmx.net
- [Bioperl-l] Lost Alignment/Clustalw.pm
David Block
- [Bioperl-l] Lost Alignment/Clustalw.pm
Jason Eric Stajich
- [Bioperl-l] Lost Alignment/Clustalw.pm
Hilmar Lapp
- [Bioperl-l] Lost Alignment/Clustalw.pm
David Block
- [Bioperl-l] Namespace for the DrawableBioSeq?
Ewan Birney
- [Bioperl-l] Namespace for the DrawableBioSeq?
David Block
- [Bioperl-l] oh yeah, the attachment
Ian Korf
- [Bioperl-l] Parsing blast report
gert thijs
- [Bioperl-l] Parsing blast report
gert thijs
- [Bioperl-l] parsing only the summary part of a blast report
Zhao, David [PRI]
- [Bioperl-l] parsing only the summary part of a blast report
Hilmar Lapp
- [Bioperl-l] parsing only the summary part of a blast report
Jason Stajich
- [Bioperl-l] parsing only the summary part of a blast report
Ian Korf
- [Bioperl-l] parsing only the summary part of a blast report
Ewan Birney
- [Bioperl-l] parsing only the summary part of a blast report
Zhao, David [PRI]
- [Bioperl-l] parsing only the summary part of a blast report
Zhao, David [PRI]
- [Bioperl-l] parsing only the summary part of a blast report
Ewan Birney
- [Bioperl-l] parsing only the summary part of a blast report
Ian Korf
- [Bioperl-l] parsing only the summary part of a blast report
gert thijs
- [Bioperl-l] program that search databais
Tsvika
- [Bioperl-l] program that search databais
Aaron J Mackey
- [Bioperl-l] program that search databais
Aaron J Mackey
- [Bioperl-l] program that search databais
Peter J Ulintz
- [Bioperl-l] program that search databais
Aaron J Mackey
- [Bioperl-l] Proposed bioperl module for local running of the
NCBI standalone blastpackage
Aaron J Mackey
- [Bioperl-l] Proposed bioperl module for local running of the
NCBI standalone blastpackage
David Block
- [Bioperl-l] Proposed bioperl module for local running of the
NCBI standalone blastpackage
chris dagdigian
- [Bioperl-l] Proposed bioperl module for local running of the
NCBI standalone blastpackage
Aaron J Mackey
- [Bioperl-l] Proposed bioperl module for local running of the NCBI
standalone blastpackage
Hilmar Lapp
- [Bioperl-l] Proposed bioperl module for local running of the NCBI
standalone blastpackage
hilmar.lapp@pharma.Novartis.com
- [Bioperl-l] Proposed bioperl module for local running of the NCBI
standalone blastpackage
Peter Schattner
- [Bioperl-l] Proposed bioperl module for local running of the NCBI standalone blast
package
Peter Schattner
- [Bioperl-l] Re: Can't locate clustalw
Peter Schattner
- [Bioperl-l] Re: Can't locate clustalw
Hilmar Lapp
- [Bioperl-l] Re: primary_seq
Ewan Birney
- [Bioperl-l] Re: primary_seq
Hilmar Lapp
- [Bioperl-l] Re: primary_seq
Hilmar Lapp
- [Bioperl-l] removing Seq features
Mark Wilkinson
- [Bioperl-l] removing Seq features
Jason Stajich
- [Bioperl-l] removing Seq features
Mark Wilkinson
- [Bioperl-l] removing Seq features
hilmar.lapp@pharma.Novartis.com
- [Bioperl-l] SCF.pm
Linus Taejoon Kwon
- [Bioperl-l] SCF.pm
Jason Stajich
- [Bioperl-l] SCF.pm
Peter van Heusden
- [Bioperl-l] SCF.pm
Linus Taejoon Kwon
- [Bioperl-l] thanks, can I go now ?
becky tagett
- [Bioperl-l] Use of Bio namespace
Keith James
- [Bioperl-l] Use of Bio namespace
Ewan Birney
- [Bioperl-l] Use of Bio namespace
Ewan Birney
- [Bioperl-l] Use of Bio namespace
Keith James
- [Bioperl-l] Use of Bio namespace
Keith James
- [Bioperl-l] Use of Bio namespace
David Block
- [Bioperl-l] Use of Bio namespace
Keith James
- [Bioperl-l] $seq->id() is read only
Kris Boulez
- [Bioperl-l] $seq->id() is read only
Kris Boulez
- [Bioperl-l] $seq->id() is read only
Ewan Birney
- [Bioperl-l] $seq->id() is read only
hilmar.lapp@pharma.Novartis.com
- [Bioperl-l] $seq->id() is read only
hilmar.lapp@pharma.Novartis.com
- [Bioperl-l] $seq->id() is read only
Kris Boulez
- [Bioperl-l] (no subject)
Raphael Noirfalise
- [Bioperl-l] 0.6.2 and /examples
Clay Shirky
- [Bioperl-l] 0.6.2 and /examples
Ewan Birney
- [Bioperl-l] 0.6.2 and /examples
Ewan Birney
- [Bioperl-l] 3rd and last candidate out?
Ewan Birney
- [Bioperl-l] ambiguous nucleotide translation table
Ian Korf
- [Bioperl-l] Bio::PrimarySeq changes
Jason Eric Stajich
- [Bioperl-l] Bio::PrimarySeq changes
David Block
- [Bioperl-l] Bio::PrimarySeq changes
Kris Boulez
- [Bioperl-l] Bio::PrimarySeq changes
Mark Wilkinson
- [Bioperl-l] Bio::Tools::Blast parsing & report generation
Brian A. Desany, Ph.D.
- [Bioperl-l] Bioperl 0.6.2 Released
Ewan Birney
- [Bioperl-l] bioperl-0.6.2pre3
David Block
- [Bioperl-l] bioperl-0.6.2pre3
Hilmar Lapp
- [Bioperl-l] bioperl-gui feedback
Ewan Birney
- [Bioperl-l] bioperl-gui now in cvs repository!
David Block
- [Bioperl-l] Can't locate "_tag_value" error message in BPlite.t test
Peter Schattner
- [Bioperl-l] Can't locate "_tag_value" error message in BPlite.t test
Hilmar Lapp
- [Bioperl-l] Can't locate "_tag_value" error message in BPlite.t test
Peter Schattner
- [Bioperl-l] Can't locate "_tag_value" error message in BPlite.t test
Hilmar Lapp
- [Bioperl-l] Changes file
Ewan Birney
- [Bioperl-l] Changes file
Hilmar Lapp
- [Bioperl-l] changes to GenBank (and other) parsing in 0.6.2?
Mark Wilkinson
- [Bioperl-l] changes to GenBank (and other) parsing in 0.6.2?
Hilmar Lapp
- [Bioperl-l] changes to GenBank (and other) parsing in 0.6.2?
Mark Wilkinson
- [Bioperl-l] clarification on Bio::DB::GenBank
Ewan Birney
- [Bioperl-l] clarification on Bio::DB::GenBank
Osborne, Brian
- [Bioperl-l] clarification on Bio::DB::GenBank
Ewan Birney
- [Bioperl-l] clarified : clarification on Bio::DB::GenBank
Osborne, Brian
- [Bioperl-l] Clustalw.pm wrapper model checked in
Peter Schattner
- [Bioperl-l] Clustalw.pm wrapper module checked in
Peter Schattner
- [Bioperl-l] Configuring BioPerl::DB for a fire wall
Kevin Clancy
- [Bioperl-l] Cruft left over in bioperl-0.6.2pre3
Ewan Birney
- [Bioperl-l] Cruft left over in bioperl-0.6.2pre3
Peter van Heusden
- [Bioperl-l] Cruft left over in bioperl-0.6.2pre3
Peter van Heusden
- [Bioperl-l] CVS tags for Ensembl
Ewan Birney
- [Bioperl-l] CVS tags for Ensembl
hilmar.lapp@pharma.Novartis.com
- [Bioperl-l] CVS tags for Ensembl
chris.dag
- [Bioperl-l] CVS tags for Ensembl
Ewan Birney
- [Bioperl-l] CVS tags for Ensembl
Hilmar Lapp
- [Bioperl-l] Detecting type of an object.
Peter van Heusden
- [Bioperl-l] Detecting type of an object.
gert thijs
- [Bioperl-l] Detecting type of an object.
hilmar.lapp@pharma.Novartis.com
- [Bioperl-l] Detecting type of an object.
Peter van Heusden
- [Bioperl-l] Feedback from the course we ran
Kris Boulez
- [Bioperl-l] Final 0.6.2 checks/merges
Ewan Birney
- [Bioperl-l] FreeBSD port of Bioperl
Johann Visagie
- [Bioperl-l] getting the Sbjct database from a hit
Catherine Letondal
- [Bioperl-l] getting the Sbjct database from a hit
Hilmar Lapp
- [Bioperl-l] getting the Sbjct database from a hit
Catherine Letondal
- [Bioperl-l] getting the Sbjct database from a hit
Hilmar Lapp
- [Bioperl-l] getting the Sbjct database from a hit
Stephen A. Chervitz
- [Bioperl-l] getting the Sbjct database from a hit
Catherine Letondal
- [Bioperl-l] getting the Sbjct database from a hit
Catherine Letondal
- [Bioperl-l] getting the Sbjct database from a hit
hlapp@gmx.net
- [Bioperl-l] How to get sequence of joins
Henrik.Seidel@schering.de
- [Bioperl-l] How to get sequence of joins
Keith James
- [Bioperl-l] Lost Alignment/Clustalw.pm
David Block
- [Bioperl-l] Lost Alignment/Clustalw.pm
Jason Eric Stajich
- [Bioperl-l] Lost Alignment/Clustalw.pm
Hilmar Lapp
- [Bioperl-l] Lost Alignment/Clustalw.pm
David Block
- [Bioperl-l] Mailbase is censoring this and our IP: Please post to all your
mail lists! God bless...
albert j. pinto
- [Bioperl-l] Namespace for the DrawableBioSeq?
Ewan Birney
- [Bioperl-l] Namespace for the DrawableBioSeq?
David Block
- [Bioperl-l] new experimental SRS module
L.Pollak
- [Bioperl-l] new experimental SRS module
Ewan Birney
- [Bioperl-l] new experimental SRS module
Lorenz Pollak
- [Bioperl-l] oh yeah, the attachment
Ian Korf
- [Bioperl-l] Parsing blast report
gert thijs
- [Bioperl-l] Parsing blast report
gert thijs
- [Bioperl-l] parsing only the summary part of a blast report
Zhao, David [PRI]
- [Bioperl-l] parsing only the summary part of a blast report
Hilmar Lapp
- [Bioperl-l] parsing only the summary part of a blast report
Jason Stajich
- [Bioperl-l] parsing only the summary part of a blast report
Ian Korf
- [Bioperl-l] parsing only the summary part of a blast report
Ewan Birney
- [Bioperl-l] parsing only the summary part of a blast report
Zhao, David [PRI]
- [Bioperl-l] parsing only the summary part of a blast report
Zhao, David [PRI]
- [Bioperl-l] parsing only the summary part of a blast report
Ewan Birney
- [Bioperl-l] parsing only the summary part of a blast report
Ian Korf
- [Bioperl-l] parsing only the summary part of a blast report
gert thijs
- [Bioperl-l] program that search databais
Tsvika
- [Bioperl-l] program that search databais
Aaron J Mackey
- [Bioperl-l] program that search databais
Aaron J Mackey
- [Bioperl-l] program that search databais
Peter J Ulintz
- [Bioperl-l] program that search databais
Aaron J Mackey
- [Bioperl-l] Proposed bioperl module for local running of the
NCBI standalone blastpackage
Aaron J Mackey
- [Bioperl-l] Proposed bioperl module for local running of the
NCBI standalone blastpackage
David Block
- [Bioperl-l] Proposed bioperl module for local running of the
NCBI standalone blastpackage
chris dagdigian
- [Bioperl-l] Proposed bioperl module for local running of the
NCBI standalone blastpackage
Aaron J Mackey
- [Bioperl-l] Proposed bioperl module for local running of the NCBI
standalone blastpackage
Hilmar Lapp
- [Bioperl-l] Proposed bioperl module for local running of the NCBI
standalone blastpackage
hilmar.lapp@pharma.Novartis.com
- [Bioperl-l] Proposed bioperl module for local running of the NCBI
standalone blastpackage
Peter Schattner
- [Bioperl-l] Proposed bioperl module for local running of the NCBI standalone blast
package
Peter Schattner
- [Bioperl-l] Re: Can't locate clustalw
Peter Schattner
- [Bioperl-l] Re: Can't locate clustalw
Hilmar Lapp
- [Bioperl-l] Re: primary_seq
Ewan Birney
- [Bioperl-l] Re: primary_seq
Hilmar Lapp
- [Bioperl-l] Re: primary_seq
Hilmar Lapp
- [Bioperl-l] removing Seq features
Mark Wilkinson
- [Bioperl-l] removing Seq features
Jason Stajich
- [Bioperl-l] removing Seq features
Mark Wilkinson
- [Bioperl-l] removing Seq features
hilmar.lapp@pharma.Novartis.com
- [Bioperl-l] removing Seq features
Ewan Birney
- [Bioperl-l] removing Seq features
Ewan Birney
- [Bioperl-l] Scanning GenPept entries does not work
Henrik.Seidel@schering.de
- [Bioperl-l] Scanning GenPept entries does not work
Henrik.Seidel@schering.de
- [Bioperl-l] Scanning GenPept entries does not work
hilmar.lapp@pharma.Novartis.com
- [Bioperl-l] SCF.pm
Linus Taejoon Kwon
- [Bioperl-l] SCF.pm
Jason Stajich
- [Bioperl-l] SCF.pm
Peter van Heusden
- [Bioperl-l] SCF.pm
Linus Taejoon Kwon
- [Bioperl-l] SCF.pm
Linus Taejoon Kwon
- [Bioperl-l] Some more troubles with HTML module?
Carl Virtanen
- [Bioperl-l] Some more troubles with HTML module?
Ewan Birney
- [Bioperl-l] Some more troubles with HTML module?
Steve Chervitz
- [Bioperl-l] thanks, can I go now ?
becky tagett
- [Bioperl-l] Use of Bio namespace
Keith James
- [Bioperl-l] Use of Bio namespace
Ewan Birney
- [Bioperl-l] Use of Bio namespace
Ewan Birney
- [Bioperl-l] Use of Bio namespace
Keith James
- [Bioperl-l] Use of Bio namespace
Keith James
- [Bioperl-l] Use of Bio namespace
David Block
- [Bioperl-l] Use of Bio namespace
Keith James
- Antwort: Re: [Bioperl-l] Scanning GenPept entries does not work
Henrik.Seidel@schering.de
Last message date:
Tue Oct 31 08:31:29 2000
Archived on: Mon Mar 5 18:01:22 2001
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