[Bioperl-l] Namespace for the DrawableBioSeq?

Ewan Birney birney@ebi.ac.uk
Mon, 2 Oct 2000 17:03:12 +0100 (GMT)


On Mon, 2 Oct 2000, David Block wrote:

> On Sat, 30 Sep 2000, Ewan Birney wrote:
> 
> > On Fri, 29 Sep 2000, David Block wrote:
> >
> ... 
> > > So, do we start our own namespace?
> > 
> > I think probably best to put it in Bio::Tk::DrawableSeq or
> > Bio::Tk::SeqCanvas (if it is a canvas)
> > 
> We like Bio::Tk::SeqCanvas, since it looks like a canvas, smells like a
> canvas, quacks like a canvas...

Sounds good to me.

> 
> > 
> > Next question - should we put this in the main cvs module or make a new
> > cvs module? I vote for a new cvs module called
> > 
> > bioperl-gui
> > 
> > or something similar...
> > 
> Should I be setting that up? and what goes in there?  We have a bioTk
> directory that would become Bio::Tk, I guess, and then the SeqCanvas would
> go a layer down.  Yep, okay.


ok. you need to set up a directory looking like

    bioperl-gui/Makefile.PL
               /README
               /Bio/Tk/SeqCanvas.pm


basically how you want to see it. *Make sure* this looks good because you
wont be able to easily go back on this next step, which is to go:

ftp stuff to bioperl (easier I find to do this locally)

cd into bioperl-gui

go *from inside bioperl-gui*

cvs -d /home/repository/bioperl import bioperl-gui pbi_nrc start

(The last two tags are vendor tags and release tags. they are not
important)

Then eh voila - one cvs repository called bioperl-gui... ;)


> 
> We're actually still waiting for the bureaucrats to decide if they want to
> shrinkwrap and try to sell this module- we're spelling G-P-L very slowly
> to them.  The NRC is used to trying to monetize all its intellectual
> property.  
> 
> Please tell me where to deposit the gold, and I will as soon as I get
> permission.
> 
> > > Have a good weekend.  We're going to a Death by Chocolate buffet to
> > > celebrate.
> > > 
> > > -Dave
> The chocolate was fantastic, by the way.
> 
> 

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Ewan Birney. Mobile: +44 (0)7970 151230, Work: +44 1223 494420
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