[Bioperl-l] bioper installation

[Tim Erwin]

> Can't locate LWP/UserAgent.pm in @INC (@INC contains:

LWP is not part of the bioperl package, you will need to install it.
You can get it from CPAN
http://search.cpan.org/~gaas/libwww-perl-5.805/ or use the cpan
installer.

Regards,

Tim


On 12/20/05, Muralidhar Metta <murali at i122server.vu-wien.ac.at> wrote:
> Dear Dr. Steven Cannon,
> I have installed current version of bioperl in my system as per the
> instruction given on your website. my OS is Mac OSX. when i'm running a
> program which has implemented bioperl in it, i'm getting the following
> error:
>
> Can't locate LWP/UserAgent.pm in @INC (@INC contains:
> /System/Library/Perl/5.8.1/darwin-thread-multi-2level
> /System/Library/Perl/5.8.1
> /Library/Perl/5.8.1/darwin-thread-multi-2level /Library/Perl/5.8.1
> /Library/Perl /Network/Library/Perl/5.8.1/darwin-thread-multi-2level
> /Network/Library/Perl/5.8.1 /Network/Library/Perl .) at
> /System/Library/Perl/5.8.1/darwin-thread-multi-2level/Bio/DB/
> WebDBSeqI.pm line 81.
> BEGIN failed--compilation aborted at
> /System/Library/Perl/5.8.1/darwin-thread-multi-2level/Bio/DB/
> WebDBSeqI.pm line 81.
> Compilation failed in require at
> /System/Library/Perl/5.8.1/darwin-thread-multi-2level/Bio/DB/
> NCBIHelper.pm line 82.
> BEGIN failed--compilation aborted at
> /System/Library/Perl/5.8.1/darwin-thread-multi-2level/Bio/DB/
> NCBIHelper.pm line 82.
> Compilation failed in require at
> /System/Library/Perl/5.8.1/darwin-thread-multi-2level/Bio/DB/GenBank.pm
> line 124.
> BEGIN failed--compilation aborted at
> /System/Library/Perl/5.8.1/darwin-thread-multi-2level/Bio/DB/GenBank.pm
> line 124.
> Compilation failed in require at genbank_parser.pl line 4.
> BEGIN failed--compilation aborted at genbank_parser.pl line 4.
>
> when i asked the author of the program about the error, he says,
> bioperl is not installed properly. can you please suggest me what could
> be the mistake that i'm making?
> Thanking you,
> With best regards,
> Murali
> Muralidhar Metta
> Graduate Student
> Institut für Tierzucht und Genetik
> Veterinärmedizinische Universität Wien
> Josef Baumann Gasse 1
> 1210 Wien
> Austria/Europe
>
>
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