[Bioperl-l] Urgent: DB module installation

[Angshu Kar]

Thank you so much Hilmar...and could you please explain this .conf part
(how/what to do)?

Gratefully,
Angshu


On 12/9/05, Hilmar Lapp <hlapp at gmx.net> wrote:
>
> The tests need a Biosql schema (otherwise testing bioperl-db is
> meaningless). If you didn't configure one in t/DBHarness.biosql.conf
> then they'll also fail ..
>
> On Dec 9, 2005, at 10:06 AM, Angshu Kar wrote:
>
> > Hi Hilmar,
> >
> > But this was while I was trying to install the Bioperl-db module. Has
> > it got anything to do with my existing schema ? I'll be obliged if you
> > could explain.
> >
> > Thanks,
> > Angshu
> >
> >
> > On 12/9/05, Hilmar Lapp <hlapp at gmx.net> wrote: If you ran the tests
> > against your 5-table version of Biosql then for
> >> sure they are going to fail.
> >>
> >>  On Dec 8, 2005, at 8:10 PM, Angshu Kar wrote:
> >>
> >> > I'm away from my lab now. I'll surely send you the error messages. I
> >> > got 16
> >> > errors when i ran the make test command and all in the .t files.
> >> Also
> >>  > could
> >> > you please let me know if I can test whether the db module has been
> >> > properly
> >> > installed using some command?
> >> >
> >> > Thanks,
> >> > Angshu
> >> >
> >> >
> >> > On 12/8/05, Barry Moore < bmoore at genetics.utah.edu> wrote:
> >> >>
> >> >> Angshu-
> >> >>
> >> >> The package you downloaded should have come with a file named
> >> INSTALL.
> >> >> Did you have specific problems following the instructions in that
> >> >> file?
> >> >>
> >> >> Barry
> >> >>
> >> >> -----Original Message-----
> >> >> From: bioperl-l-bounces at portal.open-bio.org
> >> >> [mailto: bioperl-l-bounces at portal.open-bio.org] On Behalf Of
> >> Angshu Kar
> >> >> Sent: Thursday, December 08, 2005 7:01 PM
> >> >> To: bioperl-l
> >> >> Subject: [Bioperl-l] Urgent: DB module installation
> >> >>
> >> >> Hi,
> >> >>
> >> >> Could anyone please let me know how to install Bioperl-db in
> >> WindowsXP
> >> >> as
> >> >> well as a linux machine?
> >> >>
> >> >> Thanks,
> >> >> Angshu
> >> >>
> >> >> _______________________________________________
> >> >> Bioperl-l mailing list
> >> >> Bioperl-l at portal.open-bio.org
> >> >> http://portal.open-bio.org/mailman/listinfo/bioperl-l
> >> >>
> >> >
> >> > _______________________________________________
> >> > Bioperl-l mailing list
> >> > Bioperl-l at portal.open-bio.org
> >> > http://portal.open-bio.org/mailman/listinfo/bioperl-l
> >> >
> >> >
> >> --
> >> -------------------------------------------------------------
> >> Hilmar Lappemail: lapp at gnf.org
> >> GNF, San Diego, Ca. 92121phone: +1-858-812-1757
> >> -------------------------------------------------------------
> >>
> >>
> >>
> --
> -------------------------------------------------------------
> Hilmar Lapp                            email: lapp at gnf.org
> GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
> -------------------------------------------------------------
>
>
>