[Bioperl-l] Urgent: DB module installation

[Hilmar Lapp]

The tests need a Biosql schema (otherwise testing bioperl-db is 
meaningless). If you didn't configure one in t/DBHarness.biosql.conf 
then they'll also fail ..

On Dec 9, 2005, at 10:06 AM, Angshu Kar wrote:

> Hi Hilmar,
>  
> But this was while I was trying to install the Bioperl-db module. Has 
> it got anything to do with my existing schema ? I'll be obliged if you 
> could explain.
>  
> Thanks,
> Angshu
>
>  
> On 12/9/05, Hilmar Lapp <hlapp at gmx.net> wrote: If you ran the tests 
> against your 5-table version of Biosql then for
>> sure they are going to fail.
>>
>>  On Dec 8, 2005, at 8:10 PM, Angshu Kar wrote:
>>
>> > I'm away from my lab now. I'll surely send you the error messages. I
>> > got 16
>> > errors when i ran the make test command and all in the .t files. 
>> Also
>>  > could
>> > you please let me know if I can test whether the db module has been
>> > properly
>> > installed using some command?
>> >
>> > Thanks,
>> > Angshu
>> >
>> >
>> > On 12/8/05, Barry Moore < bmoore at genetics.utah.edu> wrote:
>> >>
>> >> Angshu-
>> >>
>> >> The package you downloaded should have come with a file named 
>> INSTALL.
>> >> Did you have specific problems following the instructions in that
>> >> file?
>> >>
>> >> Barry
>> >>
>> >> -----Original Message-----
>> >> From: bioperl-l-bounces at portal.open-bio.org
>> >> [mailto: bioperl-l-bounces at portal.open-bio.org] On Behalf Of 
>> Angshu Kar
>> >> Sent: Thursday, December 08, 2005 7:01 PM
>> >> To: bioperl-l
>> >> Subject: [Bioperl-l] Urgent: DB module installation
>> >>
>> >> Hi,
>> >>
>> >> Could anyone please let me know how to install Bioperl-db in 
>> WindowsXP
>> >> as
>> >> well as a linux machine?
>> >>
>> >> Thanks,
>> >> Angshu
>> >>
>> >> _______________________________________________
>> >> Bioperl-l mailing list
>> >> Bioperl-l at portal.open-bio.org
>> >> http://portal.open-bio.org/mailman/listinfo/bioperl-l
>> >>
>> >
>> > _______________________________________________
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>> > Bioperl-l at portal.open-bio.org
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>> >
>> >
>> --
>> -------------------------------------------------------------
>> Hilmar Lapp                            email: lapp at gnf.org
>> GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
>> -------------------------------------------------------------
>>
>>
>>
-- 
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
-------------------------------------------------------------