[Bioperl-l] Problem Installing Bio::DB::EUtilities
Warren Gallin
wgallin at ualberta.ca
Sun Apr 19 19:37:25 UTC 2015
After a machine crash I have had to install all my software anew, using OS X 10.10.3 on a brand new macBook Pro.
I was able to install BioPerl, but when I have tried to install Bio::DB::EUtilities I consistently get the following failure after the tests are run:
——————————————————————————————————————————————————————————————————————————
[clipped]
All tests successful.
Files=21, Tests=756, 3 wallclock secs ( 0.13 usr 0.04 sys + 2.91 cusr 0.47 csys = 3.55 CPU)
Result: PASS
CJFIELDS/Bio-EUtilities-1.73.tar.gz
Tests succeeded but one dependency not OK (inc::TestHelper)
CJFIELDS/Bio-EUtilities-1.73.tar.gz
[dependencies] -- NA
Failed during this command:
CJFIELDS/Bio-EUtilities-1.73.tar.gz : make_test NO one dependency not OK (inc::TestHelper)
———————————————————————————————————————————————————————————
inc::Test is not, as far as I can tell, a separate module, but rather something internal to Bio::DB::EUtilities
So my question is, how do I get Utilities installed so I can access NCBI data?
Warren Gallin
More information about the Bioperl-l
mailing list