[Bioperl-l] Bio::Tools::SeqStats to count bases

Slym whereverroadgoes at gmail.com
Mon Feb 4 18:02:29 UTC 2013


The thing is, if I use Bio::SeqIO then  Bio::Tools::SeqStats produces an 
error (saying that it wants input provided by Bio::PrimarySeq).
(btw in this line
 $seqobj = Bio::PrimarySeq->new( -file => "sekw2.fasta", - alphabet => 
'dna',); 
there's a typo "sekw2" instead of "seq2" but this is correct in my original 
code).




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