[Bioperl-l] Bioperl-run Wrappers
Ben Bimber
bbimber at gmail.com
Fri Jan 28 18:18:56 UTC 2011
Hello,
I'm using CommandExts to wrap a number of tools. In a pipeline I was
looking to make the tools log their current version. I realized that
instead of using run() in a unique way for each tool, perhaps there
should be a consistent method that gets called and returns a version
string. because obtaining this version string is specific to the
tool, perhaps each wrapper could provide a version() method that runs
the appropriate command on the executable, parses, then returns some
string. has something like this been discussed? have others already
solved this?
Thanks,
Ben
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