[Bioperl-l] Undefined subroutine &Bio::DB::SeqFeature::Store::uncompress called

[Dan Bolser]

Hi,

I just updated BioPerl from git / GBrowse from svn (to check if a
particular bug was fixed), and I'm seeing the following message in
large friendly red letters across the top of my GBrowse instance:

Undefined subroutine &Bio::DB::SeqFeature::Store::uncompress called.


Unfortunately, none of the usual sequence features are displayed (no
overview or details panels).

Here is a snippet of the Apache error log:

[Wed Jan 26 16:55:15 2011] [error] [client x.x.x.x] Math::BigInt:
couldn't load specified math lib(s), fallback to Math::BigInt::Calc at
/homes/www-potato/perl5/lib/perl5/Crypt/DH.pm line 6, referer:
https://x/potato/cgi-bin/gbrowse2/gbrowse/pot_qa/?name=PGSC0003DMB000000115%3A1..600%2C001
[Wed Jan 26 16:55:15 2011] [error] [client x.x.x.x] Math::BigInt:
couldn't load specified math lib(s), fallback to Math::BigInt::Calc at
/homes/www-potato/perl5/lib/perl5/Crypt/DH.pm line 6, referer:
https://x/potato/cgi-bin/gbrowse2/gbrowse/pot_qa/?name=PGSC0003DMB000000115%3A1..600%2C001
[Wed Jan 26 16:55:15 2011] [error] [client x.x.x.x] Undefined
subroutine &Bio::DB::SeqFeature::Store::uncompress called at
/homes/www-potato/perl5/lib/perl5/Bio/DB/SeqFeature/Store.pm line
2531., referer:
https://x/potato/cgi-bin/gbrowse2/gbrowse/pot_qa/?name=PGSC0003DMB000000115%3A1..600%2C001



Thanks for guidance,
Dan.