[Bioperl-l] Bio::Tools::Run::Genemark
Chris Fields
cjfields at uiuc.edu
Thu Jun 19 21:36:40 UTC 2008
Just committed the patch to svn, so updating the local bioperl-run
from subversion should work.
chris
On Jun 19, 2008, at 4:29 PM, Mark Johnson wrote:
> It seems that GeneMark.hmm returns 0 even when the license is expired.
> You can probably guess how I discovered this. I created a bug and
> attached a fix:
>
> http://bugzilla.open-bio.org/show_bug.cgi?id=2523
>
> If you've built Bio::Tools::Run::Genemark into a gene prediction
> pipeline (as I have), you really want this fix. Otherwise, if your
> license expires, you may not realize it until you wonder why GeneMark
> has suddenly stopped predicting genes...
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