[Bioperl-l] How to run hmmpfam

Wang Lixiao lixiao_w at hotmail.com
Sun May 8 06:20:04 EDT 2005


Dear all,
I am new to bioperl.
I want to use Bio::Tools::Run::Hmmpfam and CGI with Mozilla broswer. I can 
run
my cgi file on my apache server, however, when I run it with broswer, it 
reports
some errors:

------------- EXCEPTION  -------------
MSG: Hmmpfam call (  -E 0.0001 myhmms 7LES_DROME) crashed: 0

STACK Bio::Tools::Run::Hmmpfam::_run 
/usr/local/lib/perl5/site_perl/5.8.6/Bio/Tools/Run/Hmmpfam.pm:224
STACK Bio::Tools::Run::Hmmpfam::run 
/usr/local/lib/perl5/site_perl/5.8.6/Bio/Tools/Run/Hmmpfam.pm:200
STACK toplevel /usr/local/apache/cgi-bin/seqtest.cgi:40

--------------------------------------

How can I resolve the problem? I do need your help!

Thanks,

/Lixiao




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