[Bioperl-l] Megablast Ouput

Waibhav Tembe tembe at bioanalysis.org
Tue May 3 11:40:34 EDT 2005


Hello List,

I was wondering if BioPerl parse routines from BLAST output could be 
used for megablast output as well (assuming that the display format for 
megablast output has been set to BLAST like output).

Secondly, if the output display format (-m parameter) for blastall is 
changed, is it still possible to use BioPerl blast output parsers to 
extract hits/HSPs/Evalue etc?

Thanks.

Regards,

-waibhav



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