[Bioperl-l] problems during installation

[Leonardo Kenji Shikida]

thank you. I fixed the problem installing the required non-perl libraries

regards

Kenji

On 6/27/05, Frank Lee <lifei03 at gmail.com> wrote:
> Just guess,  I believe the answer is given when you configing as this :
> 
> If you experience compile problems, please check the @INC, @LIBPATH and @LIBS
> arrays defined in Makefile.PL and manually adjust, if necessary.
> 
> For me, I will locate these files and find where they are and add them to the @INC or @LIBPATH, etc.
> 
> Wish you luck
> 
> 
> 
> 
> 
> \
> Leonardo Kenji Shikida wrote:
> 
> >trying to install using perl -MCPAN -e "install Bundle::BioPerl" in a
> >suse 9.3 box
> >
> >how should I proceed?
> >
> >
> >
> >
> >  CPAN.pm: Going to build L/LD/LDS/GD-2.19.tar.gz
> >
> >NOTICE: This module requires libgd 2.0.28 or higher.
> >        it will NOT work with earlier versions. If you are getting
> >        compile or link errors, then please get and install a new
> >        version of libgd from www.boutell.com. Do NOT ask Lincoln
> >        for help until you try this.
> >
> >        If you are using Math::Trig 1.01 or lower, it has a bug that
> >        causes a "prerequisite not found" warning to be issued.  You may
> >        safely ignore this warning.
> >
> >        Type perl Makefile.PL -h for command-line option summary
> >
> >Configuring for libgd version 2.0.32.
> >Included Features:          GD_XPM GD_JPEG GD_FONTCONFIG GD_FREETYPE GD_PNG GD_G
> >IF
> >GD library used from:       /usr
> >
> >If you experience compile problems, please check the @INC, @LIBPATH and @LIBS
> >arrays defined in Makefile.PL and manually adjust, if necessary.
> >
> >Checking if your kit is complete...
> >Looks good
> >Writing Makefile for GD
> >cp GD/Polyline.pm blib/lib/GD/Polyline.pm
> >cp qd.pl blib/lib/qd.pl
> >cp GD.pm blib/lib/GD.pm
> >AutoSplitting blib/lib/GD.pm (blib/lib/auto/GD)
> >cp GD/Simple.pm blib/lib/GD/Simple.pm
> >/usr/bin/perl /usr/lib/perl5/5.8.6/ExtUtils/xsubpp  -typemap /usr/lib/perl5/5.8.
> >6/ExtUtils/typemap -typemap typemap  GD.xs > GD.xsc && mv GD.xsc GD.c
> >cc -c  -I/usr/include -D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -DDEBUGGING
> > -fno-strict-aliasing -pipe -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -marc
> >h=i586 -mcpu=i686 -fmessage-length=0 -Wall -g -Wall -pipe   -DVERSION=\"2.19\" -
> >DXS_VERSION=\"2.19\" -fPIC "-I/usr/lib/perl5/5.8.6/i586-linux-thread-multi/CORE"
> >  -DHAVE_JPEG -DHAVE_FT -DHAVE_XPM -DHAVE_GIF -DHAVE_PNG -DHAVE_FONTCONFIG GD.c
> >GD.xs:7:16: gd.h: No such file or directory
> >GD.xs:8:21: gdfontg.h: No such file or directory
> >GD.xs:9:21: gdfontl.h: No such file or directory
> >GD.xs:10:22: gdfontmb.h: No such file or directory
> >
> >
> >
> >
> 
> 


-- 

[]

Kenji
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