[Bioperl-l] Problem of installing bioperl-run-1.4

[Jason Stajich]

What do you see when you run the test individually, you will get more  
detailed error messages.

$ perl -I. -w t/EMBOSS.t


On Jul 3, 2005, at 9:00 AM, Yu-Hsuan Lin((???)) wrote:

>>
>> Quoting "Yu-Hsuan Lin(ªL¦t°a)" <ylin9 at gel.ym.edu.tw>:
>>
>>
>>> Hi, all,
>>>
>>> I have a problem to install bioperl-run-1.4. Because I want to  
>>> use EMBOSS
>>> program within
>>>
>>> my bioperl script, I installed bioperl 1.4 and EMBOSS (
>>> /home/tools/EMBOSS-2.10.0 ) in
>>>
>>> my debian linux system. When I tried to type in command line  
>>> "make test", it
>>> said
>>>
>>> t/EMBOSS..................ok
>>>
>>>         28/30 skipped: EMBOSS not installed locally or XML::Twig not
>>> installed
>>>
>>>
>>> I also installed XML::Twig and tried symbolic link from /usr/ 
>>> local to
>>>
>>> /home/tools/EMBOSS-2.10.0 but still get the same message. Can  
>>> anyone kindly
>>> tell me how to
>>>
>>> solve this problem or where to find solution ?
>>>
>>> Thank you very much,
>>>
>>> Vincent,
>>>
>>> _______________________________________________
>>> Bioperl-l mailing list
>>> Bioperl-l at portal.open-bio.org
>>> http://portal.open-bio.org/mailman/listinfo/bioperl-l
>>>
>>>
>
>
>

--
Jason Stajich
Duke University
http://www.duke.edu/~jes12/