[Bioperl-l] problem with next_feature on Linux

[Jason Stajich]

The exact error message is in fact useful to diagnose the problem.

Are you sure you have the same version of bioperl on both machines?

In the future you also might want to use Bio::SearchIO to parse bl2seq 
output as well.

--
Jason Stajich
jason.stajich at duke.edu
http://www.duke.edu/~jes12/
On Feb 3, 2005, at 9:28 AM, Guojun Yang wrote:

> Hi, all,
> I am using the following sentence to process bl2seq result:
> while( my $hsp = $bl2seq_report->next_feature){...}
> On a windows system, it worked well, however,when I move the script on 
> to a linux system. It says "Object method next_feature not found" or 
> sth like that. Is this because of my installation of Bioperl on linux?
> Thanks,
> Guojun Yang
>
>
> ----- Original Message -----
> From: Matthias Adams <matze at bioinf.uni-leipzig.de>
> To: bioperl-l at bioperl.org
> Sent: Thu,  3 Feb 2005 01:10:29 -0500
> Subject: Re: [Bioperl-l] Genbank LOCUS entry
>
>
>> On Wed, Feb 02, 2005 at 06:46:28PM -0500, Brian Osborne wrote:
>>> You will write the Genbank entry to a string, using the Seq object
>>> (http://bioperl.org/Core/Latest/faq.html#Q2.4), and use a regular
>>> expression.
>> Good idea, thank you.
>> I now use the Seq object as an RichSeq object and take out of it
>> what I need.
>>
>> Matze.
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>
>
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