[Bioperl-l] arabidopsis + load_seqdatabase.pl

Hilmar Lapp hlapp at gmx.net
Mon Dec 19 13:07:31 EST 2005


I don't have an answer for you, but did you also try the Bulletin Board 
at bioinformatics.org?

On Dec 19, 2005, at 9:31 AM, Angshu Kar wrote:

> Hi,
>
> I'm not fully sure whether to post this question in this community. 
> But I
> feel those who are working in plant genomics using bioperl can possibly
> answer this. I'm trying to use load_seqdatabase.pl to load data into 
> the
> biosql schema.Can anyone please suggest an arabidopsis data file 
> source that
> has all the additional information (probably GENBANK format) but only 
> holds
> the CDSs?
> I'll be obliged if anyone of you who has used such a file helps me 
> with the
> answer.
>
> Thanks,
> Angshu
>
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>
-- 
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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