[Bioperl-l] loading data to biosql tables

[Barry Moore]

Angshu-

Make the namespace whatever you want it to be.  This is useful if you
want to load sequence from different sources into the same database.  As
for the format - you tell us what format is the file in?  You could just
let bioperl guess, but looking at the file and deciding yourself would
be your best bet.

Barry

> -----Original Message-----
> From: bioperl-l-bounces at portal.open-bio.org [mailto:bioperl-l-
> bounces at portal.open-bio.org] On Behalf Of Angshu Kar
> Sent: Friday, December 09, 2005 5:22 PM
> To: Sean Davis
> Cc: bioperl-l
> Subject: Re: [Bioperl-l] loading data to biosql tables
> 
> Hi Sean,
> 
> A small help I need before I run the load_seqdatabase.pl. I've
downloaded
> my
> datafile which is ATH1_cds_cm_20040228 from TAIR. What's the namespace
and
> format for this?
> 
> Thanks,
> Angshu
> 
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