[Bioperl-l] Urgent: DB module installation

[Hilmar Lapp]

Read t/DBHarness.conf.example and follow the instructions. Also, this 
is explained in the INSTALL file.

Let me know if you have questions not addressed there.

	-hilmar

On Dec 9, 2005, at 10:13 AM, Angshu Kar wrote:

> Thank you so much Hilmar...and could you please explain this .conf 
> part (how/what to do)?
>  
> Gratefully,
> Angshu
>
>  
> On 12/9/05, Hilmar Lapp <hlapp at gmx.net> wrote: The tests need a Biosql 
> schema (otherwise testing bioperl-db is
>> meaningless). If you didn't configure one in t/DBHarness.biosql.conf
>> then they'll also fail ..
>>
>> On Dec 9, 2005, at 10:06 AM, Angshu Kar wrote:
>>
>> > Hi Hilmar,
>> >
>> > But this was while I was trying to install the Bioperl-db module. 
>> Has
>> > it got anything to do with my existing schema ? I'll be obliged if 
>> you
>> > could explain.
>> >
>> > Thanks,
>> > Angshu
>> >
>> >
>> > On 12/9/05, Hilmar Lapp <hlapp at gmx.net> wrote: If you ran the tests
>> > against your 5-table version of Biosql then for
>> >> sure they are going to fail.
>> >>
>> >>  On Dec 8, 2005, at 8:10 PM, Angshu Kar wrote:
>> >>
>> >> > I'm away from my lab now. I'll surely send you the error 
>> messages. I
>> >> > got 16
>> >> > errors when i ran the make test command and all in the .t files.
>> >> Also
>> >>  > could
>> >> > you please let me know if I can test whether the db module has 
>> been
>> >> > properly
>> >> > installed using some command?
>> >> >
>> >> > Thanks,
>> >> > Angshu
>> >> >
>> >> >
>> >> > On 12/8/05, Barry Moore < bmoore at genetics.utah.edu> wrote:
>> >> >>
>> >> >> Angshu-
>> >> >>
>> >> >> The package you downloaded should have come with a file named
>> >> INSTALL.
>> >> >> Did you have specific problems following the instructions in 
>> that
>> >> >> file?
>> >> >>
>> >> >> Barry
>> >> >>
>> >> >> -----Original Message-----
>> >> >> From: bioperl-l-bounces at portal.open-bio.org
>> >> >> [mailto: bioperl-l-bounces at portal.open-bio.org] On Behalf Of
>> >> Angshu Kar
>> >> >> Sent: Thursday, December 08, 2005 7:01 PM
>> >> >> To: bioperl-l
>> >> >> Subject: [Bioperl-l] Urgent: DB module installation
>> >> >>
>> >> >> Hi,
>> >> >>
>> >> >> Could anyone please let me know how to install Bioperl-db in
>> >> WindowsXP
>> >> >> as
>> >> >> well as a linux machine?
>> >> >>
>> >> >> Thanks,
>> >> >> Angshu
>> >> >>
>> >> >> _______________________________________________
>> >> >> Bioperl-l mailing list
>> >> >> Bioperl-l at portal.open-bio.org
>> >> >> http://portal.open-bio.org/mailman/listinfo/bioperl-l
>> >> >>
>> >> >
>> >> > _______________________________________________
>> >> > Bioperl-l mailing list
>> >> > Bioperl-l at portal.open-bio.org
>> >> > http://portal.open-bio.org/mailman/listinfo/bioperl-l
>> >> >
>> >> >
>> >> --
>> >> -------------------------------------------------------------
>> >> Hilmar Lappemail: lapp at gnf.org
>> >> GNF, San Diego, Ca. 92121phone: +1-858-812-1757
>> >> -------------------------------------------------------------
>> >>
>> >>
>> >>
>> --
>> -------------------------------------------------------------
>> Hilmar Lapp                            email: lapp at gnf.org
>> GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
>> -------------------------------------------------------------
>>
>>
>>
-- 
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
-------------------------------------------------------------