[Bioperl-l] Kyte Doolittle hydropathy plot: Bio::Graphics::Glyph::protein

[Aaron J. Mackey]

I've just checked in to BioPerl the above mentioned glyph, which  
(like Glyph::dna) is a "global feature" glyph that  at high  
magnification shows raw protein sequence, but at lower magnification  
provides the standard Kyte-Doolittle hydropathy plot (adding an  
option to use Hopp-Woods scale is left as an exercise to the reader).

You can see an example of using this glyph at:

   http://v5-0.plasmodb.org/cgi-bin/gbrowse_img/plasmodbaa/?q=PF10_0238

Enjoy,

-Aaron

--
Aaron J. Mackey, Ph.D.
Project Manager, ApiDB Bioinformatics Resource Center
Penn Genomics Institute, University of Pennsylvania
email:  amackey at pcbi.upenn.edu
office: 215-898-1205 (Biology, 212 Goddard Labs)
         215-746-7018 (PCBI, 1428 Blockley Hall)
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