[Bioperl-l] Annotation Pipeline

[Charles Hauser]

Hi all,

Working on an EST project and I would like to improve our annotation
pipeline.

Currently, all I am doing is running blastx and parsing top hits with
significant evals into a postgres DB which is searchable by users.

I need to improve on this.  Targets are to:
	- automate
	- incorporate GO-terms

Conceptually I know how to do this, but implementing is another matter. 
I also know that annotation pipelines have been developed and refined by
others so I see no need to reinvent where possible.

Welcome suggestions.

regards,

Charles

Charles Hauser
Biology Dept.
Duke University
Durham, NC 27708-1000
919.613.8159