[Bioperl-l] parsing blast HIT with multiple GIs

Jason Stajich jason@cgt.mc.duke.edu
Thu, 31 Oct 2002 08:18:20 -0500 (EST)


they are in the $hit->description part.

-jason
On Thu, 31 Oct 2002, suhoiy wrote:

> Hello all,
>
> When I parse some blast results of proteins, I found some hits had
> multiple GIs, which are identical sequences. The SearchIO module
> discard the GIs without a leading >. Then how can I get all the GIs
> in a blast result? any suggestion?
>
> Many thanks! :)
>
> suhoiy
>
>
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-- 
Jason Stajich
Duke University
jason at cgt.mc.duke.edu