[Bioperl-l] Seq Object

[Hilmar Lapp]

The swissprot parser actually returns a Bio::Seq::RichSeqI compliant 
object unless you changed the sequence factory. RichSeqI has a 
method get_secondary_accessions().

	-hilmar

On Thursday, October 24, 2002, at 09:43 PM, Scott Doniger wrote:

> Hi - I'm using the Seq object to parse the SwissProt flatfile, 
> sprot40.dat. I want to extract both the swissPROT IDs and the 
> accession number(s). If a record has more than one accession number 
> (1433_CAEEL for example) the seq->accession method returns the 
> first one. Is there are way to get all of them?
>
> Thanks,
> Scott
>
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--
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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