[Bioperl-l] about FASTA report parser

Aaron J Mackey Aaron J. Mackey" <amackey@virginia.edu
Mon, 14 Oct 2002 12:54:06 -0400 (EDT)


On Mon, 14 Oct 2002, stanley wrote:

> Thanks Jason
> The fasta parser that i want is a kind of FASTA report
> parser.
> I founld a pre-mature FASTAParser module and it is
> intended for FASTA 3.3 report format.whatI downloaded
> is the new-released FASTA program(3.4).

With fasta 3.4, you'll have better luck with our Bio::SearchIO::fasta
parser, available via CVS or the recently released Developer's snapshot
version 1.1.1; note that pvm/mpi and "mlib" support is an on-going effort.

-Aaron

-- 
 Aaron J Mackey
 Pearson Laboratory
 University of Virginia
 (434) 924-2821
 amackey@virginia.edu