[Bioperl-l] Bio::Graphics & Binding Sites visualization

Tommy Kaplan tommy@cs.huji.ac.il
Thu, 10 Oct 2002 17:30:35 +0200 (IST)


Hi.

What would be the best way of visualizing a promoter sequence, with
putative binding sites of several transcription factors on it ?

I've tried to do this with Glyph::transcript2, allowing different
colors for different TFs, with possible orientation for each site, but it
wasn't that trivial.

Any ideas ?

Thanks,
Tommy Kaplan