Try: > Is there anyway currently to get the: > -query_start print "\t\tQuery Start: ", $hsp->query->start(), "\n"; > -query_end print "\t\tQuery End: ", $hsp->query->end(), "\n"; > -hit_start print "\t\tHSP Hit Start: ",$hsp->hit->start(), "\n"; > -hit_end print "\t\tHSP Hit End: ",$hsp->hit->end(), "\n"; I can send you a test script as well if you like, -Mat