[Bioperl-l] genewise runnable

[shawnh@worf.fugu-sg.org]

Guilty ;) we will start moving them out..
btw how is the wrapper factory idea coming along?


shawn

On Mon, 26 Aug 2002, Jason Stajich wrote:

> Is it possible to abstract your parsing code from the genewise runnables
> (and any other -- repeatmasker?) and make them into proper Bio::Tools::XX
> parsers s.t. we can use these modules in the general bioperl.  I sort of
> thought we were working on the model that the runnables would only contain
> code for setting up and running and exe and that they would delegate to
> parsers for the processing of the output files.  This way different
> parsers can be used and people can parse genewise output, etc w/o running
> the apps.
> 
> -j
> 
> 

-- 
'Torture the data long enough and they will reveal anything'
********************************
* Shawn Hoon
* http://www.fugu-sg.org/~shawnh
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