[Bioperl-l] [Bioperl-l]: Bio::SearchIO Blast descriptions mutilated
Martin Schenker
Martin.Schenker@ogs.co.uk
Fri, 16 Aug 2002 09:33:25 +0100
Hi all,
just a short one I hope:
While using Bio::SearchIO to retrieve Blast reports, the $hit->description
method only retrieves a single line instead of the full description:
[from BLAST report]
>AAH31333 |||H3 histone family, member A.|Homo
Sapiens||||9606|PRT|21-Jun-2002|trembl_new.dat.gz
is reduced to:
>AAH31333 |||H3 histone family, member A.|Homo
Not exactly what I wanted ;-)
Any ideas/hints how to get ALL the lines?
Thanks, Martin
********************************************************************
The information transmitted by this email is private and
confidential and is intended for the use of the intended
recipients specified therein.
If you are neither an intended recipient nor an employee
or agent responsible for delivery to an intended recipient,
you should be aware that any dissemination, distribution
or copying of this communication is strictly prohibited.
If you received this communication in error, please
notify us immediately.
********************************************************************