[Bioperl-l] BPlite -> SeqAnalysisParserI.pm

[Heikki Lehvaslaiho]

I can not reproduce the error using the 07 branch from CVS using:

$ perl -v
 
This is perl, v5.6.0 built for i386-linux ...

$ export PERL5LIB=/home/heikki/src/bioperl-07
$ perl -e 'use Bio::Tools::BPlite; my $report = new Bio::Tools::BPlite;';

Can anyone else?

	-Heikki


jdiggans@genelogic.com wrote:
> 
> Hi all, I just updated my local distro to 0.71 and am trying to port a
> rather heavy script using Bio::Tools::Blast to instead use
> Bio::Tools::BPlite for speed reasons. Now, however, when running:
> 
>      my $report = new Bio::Tools::BPlite(-fh => \*BLASTREPORT);
> 
> I get back:
> 
>      Can't locate object method "new" via package "Bio::SeqAnalysisParserI"
>      at /loc/to/my/distro/SeqAnalysisParserI.pm line 101
> 
> which reads:
> 
>      return $class->SUPER::new(@args);
> 
> Now SeqAnalysisParserI.pm ISA RootI and RootI definitely has a new() ...
> can anyone imagine why I'd be getting the above? I wouldn't ask but I've
> looked all over creation and can't find why I should get this particular
> error ....
> 
> Regards.
> - j
> 
> -------------------------------------------------
> James Diggans
> Bioinformatics Programmer
> Gene Logic, Inc.
> Phone: 301.987.1756
> FAX: 301.987.1701
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-- 
______ _/      _/_____________________________________________________
      _/      _/                      http://www.ebi.ac.uk/mutations/
     _/  _/  _/  Heikki Lehvaslaiho          heikki@ebi.ac.uk
    _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
   _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
  _/  _/  _/  Cambs. CB10 1SD, United Kingdom
     _/      Phone: +44 (0)1223 494 644   FAX: +44 (0)1223 494 468
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