[MOBY-l] [moby] Re: error when do make test
Mark Wilkinson
markw at illuminae.com
Thu Feb 16 19:42:18 UTC 2006
I think you need XML::LibXML, rather than (or as well as?) XML::DOM
M
On Thu, 2006-02-16 at 13:35 -0500, Nicholas Sutanto wrote:
> Here is actually what I'm planning to do.
>
> I have this website: http://www.cs.purdue.edu/homes/nsutanto/bio.html.
> And when we do submit query, it will call "myfile.cgi".
>
> I want to make a simple client that can access "myfile.cgi" and query
> and have a result back to me. And I want to put "myfile.cgi" to the
> biomoby, and my client can call my functions from myfile.cgi through
> biomoby.
> So, how do I put "myfile.cgi" to the biomoby?
>
> Sorry if my previous question confused you all.
> Let me know if you guys still confuse about my goal.
>
> Thanks a lot for any help.
> Nicholas Sutanto.
>
> Frank Gibbons wrote:
> > Nicholas,
> >
> > My suggestion is to ignore these errors - it's clear that you do not
> > have the modules "DBD::mysql" or XML::DOM installed. Unless you are
> > planning to set up your own MOBY Central database, you do not need
> > this. But you definitely need XML::DOM, so get it from CPAN, and while
> > you're there, you might want to just install DBD::mysql as well.
> >
> > As Eddie mentioned earlier, it would help us a lot if you explain a
> > little about what your interest and ultimate goals are: set up your
> > own database, set up a service, etc. I'll try to fix the code so that
> > the tests pass for users like you, who don't have DBD::mysql. In the
> > meantime, you should just continue to installation and then playing
> > around with the dispatcher and echo-service.
> >
> > -Frank
> >
> >
>
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Mark Wilkinson
Asst. Professor
Dept. of Medical Genetics
University of British Columbia
PI in Bioinformatics
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