[MOBY-dev] [moby] service registration situation....

[Mark Wilkinson]

Your service registrations are not correct - this is what is in the
WSDL:

<soap:address location="http:///~fgibbons/cgi/BGN/dispatcher.pl"/>

This is confirmed by looking at the database entry:
| moby     | Uetz        |
urn:lsid:biomoby.org:servicetype:Retrieval:2001-09-21T16-00-00Z |
43 | http:///~fgibbons/cgi/BGN/dispatcher.pl | fgibbons at hms.harvard.edu
| 0             | Protein-protein interactions, by Uetz et al.
 |                9727 | NULL         |
urn:lsid:biomoby.org:serviceinstance:llama.med.harvard.edu,Uetz:2006-02-27T19-03-39Z |


Can you check if this is a problem with the registration system that you
are using, or is it something mis-configured at your end?

Whose bug is it??

M





On Tue, 2006-02-28 at 12:58 -0500, Frank Gibbons wrote:
> OK,<soap:address location="http:///~fgibbons/cgi/BGN/dispatcher.pl"/>
> 
> I got caught up in the service clean-up enthusiasm (roll on spring!), 
> dereg'd all of my services, then rereg'd some of them. All seemed to go 
> smoothly, and I can retrieve service details without difficulty.
> 
> But now nothing works. As usual, due to the layering inherent in web 
> services (SOAP/HTTP, XML parsing, etc.), I'm having a really hard time 
> figuring out *where* the problem lies.
> 
> I've tried using scripts/DebugYourService.pl,
> 
> >DebugYourService.pl -a llama.med.harvard.edu -n Uetz -i simple.xml
> 
> with this input (simple.xml):
> 
> ><mobyData>
> >   <Simple>
> >     <String namespace='SGD' id='S000004075' />
> >   </Simple>
> ></mobyData>
> 
> and got this output:
> 
> >Using default BioMOBY Central.
> >---------------
> >Using service:
> >         name: Uetz
> >         authority: llama.med.harvard.edu
> >         Description: Protein-protein interactions, by Uetz et al
> >---------------
> >Service execution failed: 500 Can't connect to :80 (Bad hostname '') at 
> >MOBY/Client/Service.pm line 289
> 
> The last line is totally weird! The test suite runs without errors, and I'm 
> using the latest moby-live/Perl code under Perl 5.8.6, with SOAP::Lite v0.60.
> 
> Anybody have any ideas where I should look?
> 
> -Frank
> 
> 
> PhD, Computational Biologist,
> Harvard Medical School BCMP/SGM-322, 250 Longwood Ave, Boston MA 02115, USA.
> Tel: 617-432-3555       Fax: 
> 617-432-3557       http://llama.med.harvard.edu/~fgibbons 
> 
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-- 

--
Mark Wilkinson
Asst. Professor, Dept. of Medical Genetics
University of British Columbia
PI in Bioinformatics, iCAPTURE Centre
St. Paul's Hospital, Rm. 166, 1081 Burrard St.
Vancouver, BC, V6Z 1Y6
tel: 604 682 2344 x62129
fax: 604 806 9274

"For most of this century we have viewed communications as a conduit, 
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What's happened now is that the conduit has become so big and interesting 
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       it has become a destination in its own right..."

                Paul Saffo - Director, Institute for the Future