Sebastien.Moretti at unil.ch
Thu Oct 23 07:43:20 UTC 2008
the service, which provides EMBOSS tools as web interface, fails to
interprets properly the density ACD file.
Everything is fine in the ACD.
> colourps and cps are synonymous so you should be able to use either.
> If you want to specify the output type from the command line
> you could type:
> density -quad -qgraph=colourps inputsequence
> for a quad graph (qgraph, not ggraph in your email) or, for a dual graph
> density -dual -dgraph=cps inputsequence
> or am I misunderstanding your question?
>> According to the ACD file, the density application seems to use the
>> 'graph' qualifier.
>> When used, I get this error message:
>> Unknown qualifier -graph=colourps
>> graph seems to have been replaced by ggraph and dgraph.
>> And colourps seems to be cps now.
>> How to fix it in the source ?
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