[EMBOSS] EMBOSS remote server list?

[Ashika Umanga Umagiliya]

Hi all,

I used :

DB genbank [
  type: N
  method: url
  format: genbank
  url: "http://mrs.cmbi.ru.nl/mrs-web/entry.do?db=genbank_release&id=%s"
  comment: "GenBank from MRS on CMBI" ]

as my GenBank DB ,but some sequence id does not exist in DB.Such as:

Error: Failed to read sequence 'genbank:AJ972404'
upError: Failed to read sequence 'genbank:AJ972403'
Error: Failed to read sequence 'genbank:CAAA01078923'
Error: Failed to read sequence 'genbank:CAAA01073483'


Error: Failed to read sequence 'genbank:10129688'
Error: Failed to read sequence 'genbank:1054739'
Error: Failed to read sequence 'genbank:112004011'
Error: Failed to read sequence 'genbank:1136277'

I tried some other servers in 
http://downloads.lionbio.co.uk/publicsrs.html  and most of the servers 
didnt give results to the latter ids (10129688-113627).
Where can i find a server which has all this data?


best regards









Ashika Umanga Umagiliya wrote:
> Thank toy Sergei and all other guys..
> Now everything works fine...
>
> thanks again
> Sergei Spirin wrote:
>>>
>>> But my query
>>> entret genbank:AB019441
>>>
>>> does not work well.My entry for 'genbank' database is as :
>>>
>>> DB genbank [ type: N method: srswww format: genbank release: "NCBI"
>>> url: "http://www.infobiogen.fr/srsbin/cgi-bin/wgetz"
>>> comment: "GenBank from Infobiogen" ]
>>>
>>> I checked the URL http://www.infobiogen.fr and it says the service 
>>> is down (or something like that ,cuz i dont speak french ).
>>>
>>> Any ideas ?
>>>
>>
>> Add the following to emboss.default:
>>
>> DB genbank [
>>   type: N
>>   method: url
>>   format: genbank
>>   url: "http://mrs.cmbi.ru.nl/mrs-web/entry.do?db=genbank_release&id=%s"
>>   comment: "GenBank from MRS on CMBI" ]
>>
>> Sergei
>>
>
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