[EMBOSS] EMBOSS remote server list?
gbottu at vub.ac.be
Fri Oct 10 07:52:07 UTC 2008
Ashika Umanga Umagiliya wrote:
> It would be much appreciated if anyway can give me some working remove
> DB Urls to use with entret.
You could try these :
DB ncbi_nuc [ type: N method: entrez format: genbank
comment: 'nonredundant nuc. acid db at NCBI (by GI number)'
DB ncbi_prot [ type: P method: entrez format: genbank
comment: 'nonredundant protein db at NCBI (by GI number)'
DB cmbi_sw [ type: P comment: 'SwissProt at CMBI'
method: mrs3 dbalias: sprot format: swiss
(you can only use the entry name as identifier, e.g. cmbi_sw:papa1_carpa ; you
can figure out what databases besided "sprot" are available at
Hope this helps,
Belgian EMBnet Node
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